Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC7O00311 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDC7O00311 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC7O00311 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDC7O00311 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC7O00311 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC7O00311 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC7O00311 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC7O00311 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CDC7O00311 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.69
CDC7O00311 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC7O00311 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC7O00311 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC7O00311 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC7O00311 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.38■□□□□ 0.69
CDC7O00311 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.38■□□□□ 0.69
CDC7O00311 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC7O00311 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC7O00311 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.38■□□□□ 0.69
CDC7O00311 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDC7O00311 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC7O00311 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.38■□□□□ 0.69
CDC7O00311 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.38■□□□□ 0.69
CDC7O00311 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDC7O00311 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 AC093484.2-201ENST00000580996 2166 ntBASIC19.37■□□□□ 0.69
CDC7O00311 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CDC7O00311 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDC7O00311 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDC7O00311 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.37■□□□□ 0.69
CDC7O00311 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.37■□□□□ 0.69
CDC7O00311 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.37■□□□□ 0.69
CDC7O00311 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.37■□□□□ 0.69
CDC7O00311 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.37■□□□□ 0.69
CDC7O00311 AC098934.4-201ENST00000564127 592 ntBASIC19.37■□□□□ 0.69
CDC7O00311 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.37■□□□□ 0.69
CDC7O00311 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.37■□□□□ 0.69
CDC7O00311 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDC7O00311 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC7O00311 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.36■□□□□ 0.69
CDC7O00311 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.36■□□□□ 0.69
CDC7O00311 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 AC018553.1-201ENST00000616682 1458 ntBASIC19.36■□□□□ 0.69
CDC7O00311 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 AL138781.1-201ENST00000566567 1274 ntBASIC19.36■□□□□ 0.69
CDC7O00311 AC005829.2-201ENST00000571422 1056 ntBASIC19.36■□□□□ 0.69
CDC7O00311 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.36■□□□□ 0.69
CDC7O00311 MIR4758-201ENST00000577688 71 ntBASIC19.36■□□□□ 0.69
CDC7O00311 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.36■□□□□ 0.69
CDC7O00311 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC7O00311 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CDC7O00311 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC7O00311 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 AL390719.1-204ENST00000412397 1219 ntBASIC19.35■□□□□ 0.69
CDC7O00311 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.35■□□□□ 0.69
CDC7O00311 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CDC7O00311 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 AC006557.6-201ENST00000623071 864 ntBASIC19.35■□□□□ 0.69
CDC7O00311 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.35■□□□□ 0.69
CDC7O00311 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC7O00311 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CDC7O00311 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDC7O00311 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CDC7O00311 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC7O00311 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC7O00311 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms