Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 KRT18P14-201ENST00000534205 1250 ntBASIC18.26■□□□□ 0.51
TNFRSF11BO00300 UBE2DNL-204ENST00000602536 740 ntBASIC18.26■□□□□ 0.51
TNFRSF11BO00300 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 AC020763.4-201ENST00000623414 4170 ntBASIC18.26■□□□□ 0.51
TNFRSF11BO00300 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.26■□□□□ 0.51
TNFRSF11BO00300 AP001271.2-201ENST00000624018 1556 ntBASIC18.25■□□□□ 0.51
TNFRSF11BO00300 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 KRT19P1-201ENST00000405746 1186 ntBASIC18.25■□□□□ 0.51
TNFRSF11BO00300 YBX1P1-201ENST00000445822 960 ntBASIC18.25■□□□□ 0.51
TNFRSF11BO00300 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 AC005837.3-201ENST00000612163 286 ntBASIC18.25■□□□□ 0.51
TNFRSF11BO00300 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TNFRSF11BO00300 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 LINC01465-201ENST00000408887 1940 ntBASIC18.24■□□□□ 0.51
TNFRSF11BO00300 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 AL591742.1-201ENST00000604433 565 ntBASIC18.24■□□□□ 0.51
TNFRSF11BO00300 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNFRSF11BO00300 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 AL031963.3-201ENST00000606441 850 ntBASIC18.23■□□□□ 0.51
TNFRSF11BO00300 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 MYCNOS-205ENST00000641950 531 ntBASIC18.23■□□□□ 0.51
TNFRSF11BO00300 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.23■□□□□ 0.51
TNFRSF11BO00300 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms