Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49D1C9J1S8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 NTF6G-201ENST00000591094 616 ntBASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49D1C9J1S8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.77■□□□□ 0.75
TRIM49D1C9J1S8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
TRIM49D1C9J1S8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TRIM49D1C9J1S8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM49D1C9J1S8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM49D1C9J1S8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 RARRES2P4-201ENST00000514074 484 ntBASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 AC105020.6-201ENST00000621523 1217 ntBASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM49D1C9J1S8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 AC100791.3-201ENST00000617619 330 ntBASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM49D1C9J1S8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms