Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 NIFKP8-201ENST00000560500 874 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 PCMTD1P2-201ENST00000565017 355 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AP005119.2-201ENST00000579735 1105 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 MIR4786-201ENST00000583954 80 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC079315.1-201ENST00000602952 623 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 NDUFB9P1-201ENST00000604683 510 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 UBE2Q2P2-203ENST00000613592 761 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC005790.1-201ENST00000619774 450 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC018816.2-201ENST00000621460 353 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC138649.3-201ENST00000622154 254 ntBASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
PCDHB11Q9Y5F2 CASC19-280ENST00000642102 1351 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AL590763.1-201ENST00000398297 1545 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 OR9K2-201ENST00000305377 1122 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 MT-TD-201ENST00000387419 68 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 RN7SKP89-201ENST00000410774 242 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC017104.2-201ENST00000417000 321 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC109638.1-201ENST00000417406 326 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 RPA2P2-201ENST00000419698 796 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC069154.1-201ENST00000432914 542 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 DPPA3P1-201ENST00000448050 469 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AL451074.1-202ENST00000453762 989 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 RPS6P25-201ENST00000464444 748 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 MTCYBP18-201ENST00000501056 747 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC112203.1-201ENST00000506315 1020 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC091133.4-201ENST00000511142 308 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 OR4C2P-201ENST00000530855 1064 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 CYP4A44P-201ENST00000569984 154 ntBASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.84□□□□□ -1.15
PCDHB11Q9Y5F2 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 299.8 ms