Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 BX323845.2-201ENST00000458382 234 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 FAM177A1P1-201ENST00000503598 473 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC233724.1-201ENST00000503894 233 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CYP4A44P-201ENST00000569984 154 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC074051.3-201ENST00000570238 358 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 MIR3680-2-201ENST00000578247 87 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 MIR3680-1-201ENST00000581433 87 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC008498.1-201ENST00000613012 531 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC124319.3-201ENST00000616832 526 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 MIR6503-201ENST00000622884 86 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC130456.6-201ENST00000623745 765 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AL359715.4-201ENST00000606629 1436 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 MFSD8-227ENST00000641393 4069 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC006600.2-201ENST00000624834 2506 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 XRCC6P2-201ENST00000457831 1822 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 Y_RNA.248-201ENST00000364501 109 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 C1DP1-201ENST00000426049 402 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 RAC1P8-201ENST00000427086 527 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 RHEBP2-201ENST00000450289 600 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 GAPDHP53-201ENST00000458397 924 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC022336.1-201ENST00000475510 337 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 RPL30P6-201ENST00000475925 342 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 NPY6R-201ENST00000503807 1112 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC016957.1-201ENST00000534895 309 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 DUXAP1-201ENST00000556632 463 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 TUG1_1.1-201ENST00000610654 145 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC004223.4-201ENST00000612426 332 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC095031.1-201ENST00000623685 672 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 CASC19-264ENST00000641912 1184 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AC087359.1-201ENST00000508335 1740 ntBASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
ZC3H4Q9UPT8 AL359263.1-201ENST00000441188 2796 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms