Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC036111.2-201ENST00000533247 901 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 RPSAP75-201ENST00000605848 301 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC012676.3-201ENST00000614983 479 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AC022325.1-201ENST00000502748 2199 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AL590004.3-202ENST00000445883 451 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AL451063.1-201ENST00000450164 1133 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 RN7SL552P-201ENST00000462094 276 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AC021269.1-201ENST00000526860 705 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 NPIPB14P-203ENST00000532298 987 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 BMS1P16-201ENST00000556075 1147 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AC119403.2-201ENST00000590960 598 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AL136097.3-201ENST00000611097 505 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AC018717.1-201ENST00000457712 1505 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 SNX18P3-202ENST00000565670 1750 ntBASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
VPS29Q9UBQ0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AL096829.1-201ENST00000413677 457 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 Z82198.3-201ENST00000421145 199 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 PSMD10P2-201ENST00000432890 672 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 LINC00328-2P-201ENST00000436585 219 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 LDHAP2-201ENST00000437325 985 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 CUBNP2-201ENST00000443534 1139 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 RPL12P30-201ENST00000488389 499 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 ZNF519P4-201ENST00000514008 125 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 MT1CP-201ENST00000567054 174 ntBASIC5.81□□□□□ -1.48
VPS29Q9UBQ0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms