Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC079905.1-201ENST00000549280 475 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 LINC00556-201ENST00000569603 412 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AL138895.2-201ENST00000603019 178 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC067773.1-201ENST00000603284 1094 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC078880.4-201ENST00000617627 1749 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 RNU1-134P-201ENST00000362935 165 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 LCN1P2-201ENST00000372030 223 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 MIR433-201ENST00000384837 93 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 RNU11-6P-201ENST00000391127 133 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 RPS7P8-201ENST00000418311 581 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 EIF5AP4-201ENST00000441206 465 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 SERPINA7P1-201ENST00000443077 631 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC098847.1-201ENST00000473094 348 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 RPL12P24-201ENST00000474907 486 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC025458.1-201ENST00000506046 166 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC027369.2-201ENST00000528030 440 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AP004609.2-201ENST00000532177 190 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC092865.1-201ENST00000544395 1023 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AP002833.3-201ENST00000625075 2265 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC008627.1-201ENST00000517511 1704 ntBASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCF1Q9UBD9 XKRY2-202ENST00000623874 1581 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 XKRY-202ENST00000624960 1581 ntBASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCF1Q9UBD9 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms