Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNGAP1Q96PV0 AC068213.1-201ENST00000625124 226 ntBASIC7.9□□□□□ -1.14
SYNGAP1Q96PV0 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.9□□□□□ -1.14
SYNGAP1Q96PV0 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNGAP1Q96PV0 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SYNGAP1Q96PV0 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 RNU6-354P-201ENST00000383862 107 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 RNU6-610P-201ENST00000384264 107 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC010153.1-201ENST00000432862 727 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC016772.1-201ENST00000444170 1261 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC092601.1-201ENST00000444526 383 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 ATG12P2-201ENST00000456830 416 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 RPS17P11-201ENST00000474297 293 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 RPL29P23-201ENST00000486188 442 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 RPS3AP22-201ENST00000488297 769 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 MTCYBP16-201ENST00000509187 1129 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 MAST4-IT1-201ENST00000514241 658 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC027308.1-201ENST00000517993 110 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 OR4A42P-201ENST00000531397 938 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC007537.1-201ENST00000539347 327 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC023161.2-201ENST00000551218 780 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 EIF1P5-201ENST00000585002 234 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC124856.1-201ENST00000600819 896 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC073387.2-201ENST00000604797 784 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC008555.7-201ENST00000605008 583 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC099785.1-201ENST00000605697 437 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AL096803.3-201ENST00000609032 532 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC025016.1-201ENST00000616746 682 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AP005212.3-201ENST00000619964 528 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 OR7A1P-202ENST00000641542 1158 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 CTAGE11P-201ENST00000451540 2353 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 THAP12P8-201ENST00000447914 2115 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 CR382285.2-201ENST00000624662 1495 ntBASIC7.89□□□□□ -1.15
SYNGAP1Q96PV0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 RNA5SP308-201ENST00000362532 115 ntBASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNGAP1Q96PV0 FO393414.1-201ENST00000428697 1184 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms