Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 H3F3AP5-201ENST00000475267 429 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 RN7SL369P-201ENST00000477138 299 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC098818.1-201ENST00000478593 252 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 RPS27P20-201ENST00000492051 246 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC090058.1-201ENST00000498788 435 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC092349.1-201ENST00000504903 310 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 GUSBP9-201ENST00000510138 584 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AP003033.2-201ENST00000528901 805 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC023310.2-201ENST00000553844 547 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC005332.4-201ENST00000592752 579 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 AL360012.1-201ENST00000602813 131 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC063952.1-203ENST00000634410 658 ntBASIC5.84□□□□□ -1.47
COL21A1Q96P44 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL21A1Q96P44 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.84□□□□□ -1.47
COL21A1Q96P44 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL21A1Q96P44 AC130360.2-201ENST00000533477 1556 ntBASIC5.84□□□□□ -1.48
COL21A1Q96P44 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
COL21A1Q96P44 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL21A1Q96P44 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
COL21A1Q96P44 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.48
COL21A1Q96P44 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC083837.1-201ENST00000565297 2994 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 CCNT2P1-201ENST00000423082 1315 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 OR56A4-201ENST00000330728 1209 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 RPL7L1P3-201ENST00000455249 689 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 RARRES2P3-201ENST00000457739 473 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 HMGN1P16-201ENST00000508308 283 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 RN7SL230P-201ENST00000580835 303 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC027229.1-201ENST00000583887 253 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC093388.1-201ENST00000609166 430 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC003992.1-201ENST00000635364 557 ntBASIC5.83□□□□□ -1.48
COL21A1Q96P44 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL21A1Q96P44 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.83□□□□□ -1.48
COL21A1Q96P44 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 HDAC1P2-201ENST00000453661 1398 ntBASIC5.82□□□□□ -1.48
COL21A1Q96P44 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.82□□□□□ -1.48
COL21A1Q96P44 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL21A1Q96P44 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms