Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VMP1Q96GC9 AC003985.2-201ENST00000562268 1669 ntBASIC6.23□□□□□ -1.41
VMP1Q96GC9 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC144833.1-201ENST00000567953 4089 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC096537.2-201ENST00000413707 714 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC007568.1-201ENST00000422912 471 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 MRPS21P2-201ENST00000424704 264 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC021876.1-201ENST00000425959 359 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AL137246.2-201ENST00000613439 662 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 HTR1DP1-201ENST00000616500 888 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 RAB28P4-201ENST00000622233 665 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC068213.1-201ENST00000625124 226 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AP001153.1-201ENST00000641024 338 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 AC010266.2-201ENST00000564741 3255 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.22□□□□□ -1.41
VMP1Q96GC9 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VMP1Q96GC9 PSMC1P4-201ENST00000515236 1327 ntBASIC6.22□□□□□ -1.41
VMP1Q96GC9 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
VMP1Q96GC9 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
VMP1Q96GC9 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VMP1Q96GC9 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.21□□□□□ -1.41
VMP1Q96GC9 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
VMP1Q96GC9 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.21□□□□□ -1.41
VMP1Q96GC9 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
VMP1Q96GC9 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VMP1Q96GC9 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VMP1Q96GC9 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VMP1Q96GC9 RNA5SP140-201ENST00000364524 92 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 RN7SKP188-201ENST00000410789 317 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 Z82198.3-201ENST00000421145 199 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 GAPDHP19-201ENST00000431768 1005 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 AL355355.1-201ENST00000442900 793 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 AL031681.1-201ENST00000443304 400 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 OR52H2P-201ENST00000514607 902 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 AP000919.1-201ENST00000582850 985 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 OR7M1P-201ENST00000608946 533 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 MIR6813-201ENST00000621638 56 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 AP000577.1-201ENST00000624366 878 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 FANCD2P2-201ENST00000437591 1400 ntBASIC6.21□□□□□ -1.42
VMP1Q96GC9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.21□□□□□ -1.42
VMP1Q96GC9 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VMP1Q96GC9 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms