Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC092601.1-201ENST00000444526 383 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AL133351.3-201ENST00000454998 193 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC090589.1-201ENST00000473109 362 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 Y_RNA.710-201ENST00000516975 110 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC008055.1-201ENST00000547032 609 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 GLYATL1P2-202ENST00000588046 902 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AL137067.2-201ENST00000621202 131 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 ZNF101P1-201ENST00000435701 1720 ntBASIC5.91□□□□□ -1.46
CLHC1Q8NHS4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 RPL11P4-201ENST00000332269 436 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 YWHAZP4-201ENST00000392459 708 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 GAPDHP23-201ENST00000444823 993 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 OR4D12P-201ENST00000509361 911 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AC135983.3-201ENST00000528049 1226 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 DYNLL1P1-201ENST00000595442 269 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AL591167.1-201ENST00000607321 456 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CLHC1Q8NHS4 AC027279.4-201ENST00000624371 2072 ntBASIC5.9□□□□□ -1.47
CLHC1Q8NHS4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLHC1Q8NHS4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CLHC1Q8NHS4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLHC1Q8NHS4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLHC1Q8NHS4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CLHC1Q8NHS4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CLHC1Q8NHS4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 PROS2P-201ENST00000474651 1951 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 RNA5SP375-201ENST00000362975 119 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 RNU1-49P-201ENST00000363468 159 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 RNA5SP346-201ENST00000363541 121 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 RNA5SP485-201ENST00000365053 119 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 RNA5SP77-201ENST00000365394 120 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 SNORD94-201ENST00000386037 137 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 AL157702.1-201ENST00000398764 426 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 AL121835.1-201ENST00000404250 354 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 MTND2P12-201ENST00000417560 1252 ntBASIC5.89□□□□□ -1.47
CLHC1Q8NHS4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms