Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 MRPS21P8-201ENST00000569196 235 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AC090616.1-201ENST00000583895 447 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AC015982.1-201ENST00000608113 465 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AL136097.3-201ENST00000611097 505 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 MSL3P1-202ENST00000440028 1468 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AL136984.1-201ENST00000607611 1893 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 AC092724.1-201ENST00000624623 3397 ntBASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDND2Q8NHS1 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 COX6B1P3-201ENST00000312310 260 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 RN7SKP275-201ENST00000364626 301 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AL023284.3-201ENST00000407767 334 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 CYCSP52-201ENST00000422857 310 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AL389925.1-201ENST00000432257 728 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 PNKDP1-201ENST00000435914 430 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 SUMO2P10-201ENST00000452006 288 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC016724.1-201ENST00000453215 421 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC068228.1-201ENST00000461723 211 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 COX6B1P4-201ENST00000519826 484 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 IGHV1-14-201ENST00000523391 241 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC036111.2-201ENST00000533247 901 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AP005136.2-201ENST00000583253 1049 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AL138895.2-201ENST00000603019 178 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AP001437.1-201ENST00000608783 456 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AL080312.2-201ENST00000613001 630 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AL355480.1-201ENST00000629041 99 ntBASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDND2Q8NHS1 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 AL353763.1-201ENST00000624467 1628 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 AC004386.1-201ENST00000393214 761 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 DNAJA1P5-201ENST00000440278 943 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 AL133351.3-201ENST00000454998 193 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 AC094085.1-201ENST00000468914 584 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 PPP1R11P1-201ENST00000486095 376 ntBASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDND2Q8NHS1 OR7E99P-201ENST00000505750 922 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms