Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 RPS18P1-201ENST00000447840 458 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AL034369.1-201ENST00000453808 477 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 BX276092.8-201ENST00000455722 250 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 RANP2-201ENST00000456833 229 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 RN7SKP198-201ENST00000459286 306 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 RN7SL393P-201ENST00000463588 296 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC090602.1-201ENST00000469695 252 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC093878.1-201ENST00000515630 432 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 MIR6889-201ENST00000613185 59 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 AC089998.1-201ENST00000548575 3141 ntBASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.77□□□□□ -1.33
CCDC112Q8NEF3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 VTI1BP4-201ENST00000427516 527 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 HMGN1P32-201ENST00000441744 256 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 YRDCP3-201ENST00000456507 480 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AP003385.3-201ENST00000472498 287 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RN7SL741P-201ENST00000482473 289 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC114324.2-202ENST00000503812 134 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 snoU109.5-201ENST00000516231 132 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RN7SL371P-201ENST00000578099 267 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC138207.8-204ENST00000579588 527 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AL589863.1-201ENST00000595383 631 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 DYNLL1P1-201ENST00000595442 269 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC004805.3-201ENST00000603178 310 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC024651.2-201ENST00000562480 2098 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AC007998.4-201ENST00000612496 2533 ntBASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CCDC112Q8NEF3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 AC095038.1-201ENST00000429248 1591 ntBASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
CCDC112Q8NEF3 U3.10-201ENST00000364459 214 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms