| CNTN4 | Q8IWV2 | LINC02512-201 | ENST00000509548 | 429 nt | TSL 5 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | COPS4-209 | ENST00000511653 | 1695 nt | TSL 1 (best) BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LINC02196-201 | ENST00000512838 | 568 nt | TSL 4 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | COX6C-205 | ENST00000520468 | 1098 nt | APPRIS P1 TSL 1 (best) BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AL049836.2-201 | ENST00000553318 | 513 nt | TSL 5 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | C14orf2-211 | ENST00000557040 | 472 nt | APPRIS P1 TSL 3 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LINC01895-201 | ENST00000558690 | 404 nt | TSL 5 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | DSG1-AS1-202 | ENST00000578477 | 588 nt | TSL 3 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC093484.5-201 | ENST00000585048 | 304 nt | TSL 3 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC005726.5-201 | ENST00000585189 | 298 nt | TSL 5 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC025809.1-201 | ENST00000585336 | 560 nt | TSL 4 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC020909.2-201 | ENST00000595005 | 626 nt | TSL 2 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC020915.3-201 | ENST00000595301 | 550 nt | TSL 5 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SETSIP-202 | ENST00000596516 | 909 nt | APPRIS P2 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AP2B1-211 | ENST00000610402 | 3204 nt | APPRIS P1 TSL 1 (best) BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | Metazoa_SRP.94-201 | ENST00000612609 | 250 nt | BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AL929601.4-201 | ENST00000613011 | 1341 nt | BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC004852.2-201 | ENST00000614289 | 2218 nt | TSL 1 (best) BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC089999.3-201 | ENST00000622440 | 577 nt | BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | ZNF432-202 | ENST00000594154 | 4513 nt | APPRIS P1 TSL 1 (best) BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | IL21-AS1-201 | ENST00000417927 | 3748 nt | TSL 1 (best) BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | KCNAB1-212 | ENST00000490337 | 3122 nt | TSL 1 (best) BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC092958.1-201 | ENST00000467198 | 2569 nt | TSL 2 BASIC | 6.12 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | FABP2-201 | ENST00000274024 | 2478 nt | APPRIS P1 TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC024587.1-201 | ENST00000505925 | 2157 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LINC01470-202 | ENST00000506723 | 2193 nt | TSL 2 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AL080276.2-201 | ENST00000637995 | 2090 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LINC01787-201 | ENST00000435311 | 1994 nt | TSL 2 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | ASAH2-203 | ENST00000443575 | 1942 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | MBNL1-204 | ENST00000324210 | 5465 nt | APPRIS ALT1 TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AGBL1-201 | ENST00000441037 | 3551 nt | APPRIS ALT2 TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | CSNK1G1-204 | ENST00000606793 | 1658 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC130360.2-201 | ENST00000533477 | 1556 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LINC01613-201 | ENST00000561476 | 2780 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LIPF-201 | ENST00000238983 | 1376 nt | APPRIS P1 TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC233968.1-201 | ENST00000611212 | 1300 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | NUDT6-202 | ENST00000339154 | 1065 nt | TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SNORD1C-201 | ENST00000363315 | 78 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AL626787.1-201 | ENST00000366136 | 594 nt | TSL 4 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | FCGR1B-202 | ENST00000369383 | 570 nt | TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | FAM66C-201 | ENST00000372173 | 678 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | IGLV3-16-201 | ENST00000390311 | 385 nt | APPRIS P1 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SNORA77.2-201 | ENST00000408571 | 112 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RNA5SP198-201 | ENST00000410376 | 127 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RN7SKP166-201 | ENST00000410812 | 305 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC104463.1-201 | ENST00000411431 | 365 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC009468.1-201 | ENST00000412800 | 437 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC074035.1-201 | ENST00000420725 | 1184 nt | TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AL031846.1-202 | ENST00000424436 | 592 nt | TSL 2 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | TRGV7-201 | ENST00000427089 | 353 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC073257.1-201 | ENST00000432474 | 523 nt | TSL 4 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | KRTAP2-5P-201 | ENST00000446109 | 396 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RPS18P1-201 | ENST00000447840 | 458 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC136489.1-203 | ENST00000450246 | 736 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AL162739.1-201 | ENST00000450606 | 307 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RN7SL352P-201 | ENST00000466002 | 277 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | PFN2-209 | ENST00000481275 | 560 nt | TSL 4 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SOX2-OT-210 | ENST00000487240 | 751 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC124893.1-201 | ENST00000496247 | 545 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC108866.1-203 | ENST00000504106 | 529 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC090958.1-201 | ENST00000511122 | 351 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RNU4-18P-201 | ENST00000516751 | 149 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SUMO2P19-201 | ENST00000518920 | 295 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | TPM3P3-201 | ENST00000521343 | 354 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | IGHVIII-11-1-201 | ENST00000522733 | 267 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AP003028.1-203 | ENST00000525832 | 444 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AP002754.2-201 | ENST00000542121 | 462 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC244502.3-201 | ENST00000555460 | 457 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC013652.2-202 | ENST00000558948 | 910 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC134312.6-201 | ENST00000568587 | 444 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RPARP-AS1-204 | ENST00000594818 | 445 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AP001823.1-201 | ENST00000604056 | 1003 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | ARF4-AS1-203 | ENST00000607782 | 552 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC087821.1-201 | ENST00000623639 | 567 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | OXSM-209 | ENST00000626005 | 309 nt | TSL 3 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SCN2A-209 | ENST00000636071 | 8881 nt | APPRIS ALT1 TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SCN2A-214 | ENST00000636985 | 8856 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | ANK2-201 | ENST00000264366 | 11775 nt | APPRIS ALT2 TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | ZNF568-214 | ENST00000616085 | 3542 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RBPJ-202 | ENST00000342320 | 5761 nt | APPRIS P3 TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | GNG2-212 | ENST00000556752 | 3424 nt | APPRIS P1 TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | NEDD9-202 | ENST00000379446 | 4536 nt | APPRIS P3 TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | MKL2-202 | ENST00000571589 | 8799 nt | APPRIS ALT2 TSL 2 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | ZNF780A-203 | ENST00000450241 | 7500 nt | TSL 2 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | GRIK1-201 | ENST00000327783 | 3179 nt | TSL 5 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LINC01722-201 | ENST00000456265 | 3033 nt | TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | CHRDL1-202 | ENST00000372045 | 3860 nt | TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | GRAMD1C-208 | ENST00000472026 | 1876 nt | TSL 2 BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AKAP17BP-201 | ENST00000431706 | 2719 nt | BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | FGL2-201 | ENST00000248598 | 4261 nt | APPRIS P1 TSL 1 (best) BASIC | 6.11 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | ZNF727-201 | ENST00000456806 | 1679 nt | APPRIS P1 TSL 4 BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | OOSP2-201 | ENST00000278855 | 1633 nt | APPRIS P2 TSL 1 (best) BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | AC092378.1-202 | ENST00000500117 | 2296 nt | TSL 2 BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | NEGR1-202 | ENST00000357731 | 12811 nt | APPRIS P1 TSL 1 (best) BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | YTHDC1-207 | ENST00000579690 | 2983 nt | APPRIS ALT2 TSL 5 BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | RBMS2-202 | ENST00000542360 | 1484 nt | TSL 2 BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | CR382285.2-201 | ENST00000624662 | 1495 nt | BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | CTAGE5-204 | ENST00000341749 | 2912 nt | TSL 1 (best) BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | LAMA2-201 | ENST00000421865 | 9640 nt | APPRIS P2 TSL 5 BASIC | 6.1 | □□□□□ -1.43 | | |
| CNTN4 | Q8IWV2 | SYTL2-208 | ENST00000524452 | 2733 nt | APPRIS P3 TSL 2 BASIC | 6.1 | □□□□□ -1.43 | | |