Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AMELX-201ENST00000348912 737 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 RNU6-666P-201ENST00000363499 107 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 RNA5SP176-201ENST00000390956 110 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 HMGB3P18-201ENST00000406327 590 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL033519.1-201ENST00000407266 307 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 RPLP1P10-201ENST00000413972 339 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 PTPN2P1-201ENST00000423212 1072 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 GPN3P1-201ENST00000423883 535 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 MYO5BP3-201ENST00000431872 1279 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 RPS27AP2-201ENST00000457576 465 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC126121.1-201ENST00000482313 553 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL117692.1-201ENST00000494283 713 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 PRELID3BP4-201ENST00000515476 571 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC025260.1-201ENST00000548858 430 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 NDUFAF4P1-201ENST00000559425 519 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC024267.2-201ENST00000582737 417 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC015688.2-201ENST00000584523 262 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC015801.1-201ENST00000585651 153 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 NBR2-204ENST00000587322 63 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL356986.1-201ENST00000604085 341 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL137000.1-201ENST00000610528 1244 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC139769.3-201ENST00000618383 175 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 CLUHP10-201ENST00000631979 980 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 XRCC6P4-201ENST00000518193 2067 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AC145138.1-201ENST00000512908 2851 ntBASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS4Q8IUM7 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 HSPA8P11-201ENST00000508840 1898 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 ATP5BP1-201ENST00000411980 1574 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 TMEM75-201ENST00000624314 2165 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 SNORD94-201ENST00000386037 137 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 RN7SKP205-201ENST00000410999 307 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 AC022028.1-201ENST00000412054 408 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 RAP1BP1-201ENST00000412709 553 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 RPL24P2-201ENST00000421023 475 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 MTND4P20-201ENST00000424125 869 ntBASIC7.72□□□□□ -1.17
NPAS4Q8IUM7 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms