Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 AL953862.2-201ENST00000603089 820 ntBASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 BNIP3P7-201ENST00000605641 516 ntBASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 BX322635.1-201ENST00000605804 496 ntBASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 AL136097.3-201ENST00000611097 505 ntBASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 AC005393.1-201ENST00000617916 584 ntBASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 AL161420.1-201ENST00000619393 264 ntBASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 AC079753.1-201ENST00000623243 3868 ntBASIC5.46□□□□□ -1.54
PDLIM3Q53GG5 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC006213.6-201ENST00000623722 4179 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 CDC27P2-201ENST00000425026 1922 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AL589994.1-201ENST00000404962 340 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 RPLP1P10-201ENST00000413972 339 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 MTND4LP17-201ENST00000414607 293 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC003989.1-201ENST00000434569 565 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 POU5F1P5-201ENST00000445059 658 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 GAPDHP53-201ENST00000458397 924 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 RN7SL70P-201ENST00000478322 302 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC083906.1-201ENST00000509298 406 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 DCAF13P2-201ENST00000514188 555 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 OR1E3-201ENST00000575608 948 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC020914.7-201ENST00000594477 545 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC012368.3-201ENST00000604190 219 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC011891.2-201ENST00000604949 397 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AL136295.6-201ENST00000610486 658 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 OR8G7P-201ENST00000616658 848 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AC089999.3-201ENST00000622440 577 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 AP000577.1-201ENST00000624366 878 ntBASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM3Q53GG5 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 MTCO1P7-201ENST00000419523 1542 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 AC010894.1-201ENST00000313760 361 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 RNU1-5P-201ENST00000362684 144 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 RNA5SP382-201ENST00000363355 112 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 RN7SKP55-201ENST00000364888 307 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 SNORA70.3-201ENST00000365075 132 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 AL079341.1-201ENST00000404701 1207 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 AL512422.1-201ENST00000407033 553 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 RPL12P12-201ENST00000424633 501 ntBASIC5.44□□□□□ -1.54
PDLIM3Q53GG5 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms