Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AL360271.1-201ENST00000395679 510 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AL512593.1-201ENST00000444758 779 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.54□□□□□ -1.52
FOXF1Q12946 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 RPL7L1P3-201ENST00000455249 689 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 AC122718.2-201ENST00000505325 591 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 HSD3BP3-201ENST00000514706 994 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AC084121.1-201ENST00000533882 835 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.54□□□□□ -1.52
FOXF1Q12946 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AC027334.1-201ENST00000603257 310 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 AC124916.2-201ENST00000604416 224 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AC073389.3-201ENST00000609434 935 ntBASIC5.54□□□□□ -1.52
FOXF1Q12946 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FOXF1Q12946 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
FOXF1Q12946 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXF1Q12946 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXF1Q12946 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
FOXF1Q12946 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXF1Q12946 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXF1Q12946 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXF1Q12946 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXF1Q12946 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 RNU1-134P-201ENST00000362935 165 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXF1Q12946 RN7SKP151-201ENST00000410230 316 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXF1Q12946 RPL35AP31-201ENST00000418340 337 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXF1Q12946 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 SEPT14P12-201ENST00000442280 560 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 ZNF619P1-201ENST00000446539 752 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXF1Q12946 AC068491.1-201ENST00000449539 1241 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 RAB28P2-201ENST00000454299 641 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXF1Q12946 AC128716.1-201ENST00000475129 166 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 RN7SL741P-201ENST00000482473 289 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AL158068.1-201ENST00000506116 616 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 Vault.2-201ENST00000516519 98 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 SNORA81.2-201ENST00000516868 170 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 RN7SKP35-201ENST00000517210 151 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXF1Q12946 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.53□□□□□ -1.52
FOXF1Q12946 AC023310.2-201ENST00000553844 547 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXF1Q12946 AC090651.1-201ENST00000567865 634 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXF1Q12946 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXF1Q12946 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXF1Q12946 AC004801.6-201ENST00000616571 978 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AL591926.1-201ENST00000620542 217 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXF1Q12946 AC005225.5-201ENST00000623547 2225 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AC093297.3-201ENST00000607056 2517 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 AL121768.1-201ENST00000613917 2544 ntBASIC5.53□□□□□ -1.52
FOXF1Q12946 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXF1Q12946 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXF1Q12946 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXF1Q12946 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms