Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN1BQ07699 BIN2P1-201ENST00000504996 1530 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN1BQ07699 AC016745.2-201ENST00000608834 3443 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.65□□□□□ -1.5
SCN1BQ07699 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SCN1BQ07699 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SCN1BQ07699 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN1BQ07699 RNU6-819P-201ENST00000364116 107 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 MIR187-201ENST00000385062 109 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 RNA5SP474-201ENST00000391234 90 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 CXADRP1-201ENST00000398098 1095 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AL139039.2-201ENST00000407436 479 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN1BQ07699 AC106901.1-201ENST00000425086 698 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AC016027.5-201ENST00000427227 210 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN1BQ07699 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.65□□□□□ -1.5
SCN1BQ07699 AC083855.1-201ENST00000440041 258 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 SNRPBP1-201ENST00000443634 282 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 PFN1P11-201ENST00000445829 389 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 RPL7AP23-201ENST00000482625 776 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AF305872.1-201ENST00000485217 471 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 OR9N1P-201ENST00000491296 333 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 ASNSP4-201ENST00000511103 447 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AC008429.4-201ENST00000521201 182 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AP001994.1-201ENST00000527539 826 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 BCAS2P1-201ENST00000528022 632 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SCN1BQ07699 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN1BQ07699 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.65□□□□□ -1.5
SCN1BQ07699 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SCN1BQ07699 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.65□□□□□ -1.5
SCN1BQ07699 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN1BQ07699 MIR5682-201ENST00000584864 76 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AP001357.1-201ENST00000586304 1053 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN1BQ07699 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.65□□□□□ -1.5
SCN1BQ07699 CXADRP3-202ENST00000617265 1100 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 MRPL57P3-201ENST00000619218 176 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 AC243725.1-201ENST00000637164 436 ntBASIC5.65□□□□□ -1.5
SCN1BQ07699 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.65□□□□□ -1.5
SCN1BQ07699 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCN1BQ07699 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SCN1BQ07699 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SCN1BQ07699 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SCN1BQ07699 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.65□□□□□ -1.51
SCN1BQ07699 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCN1BQ07699 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.65□□□□□ -1.51
SCN1BQ07699 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
SCN1BQ07699 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SCN1BQ07699 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.65□□□□□ -1.51
SCN1BQ07699 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SCN1BQ07699 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SCN1BQ07699 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SCN1BQ07699 SNORA70.3-201ENST00000365075 132 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 RN7SKP186-201ENST00000365371 303 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 U3.23-201ENST00000391132 200 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC024937.2-201ENST00000411669 1242 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 CYP4F30P-202ENST00000420048 405 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 REREP1Y-201ENST00000422655 198 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 NPM1P26-201ENST00000426339 738 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 FTLP19-201ENST00000433300 394 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SCN1BQ07699 REREP2Y-201ENST00000439103 200 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 SEPT7P3-201ENST00000455017 621 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.64□□□□□ -1.51
SCN1BQ07699 RN7SL868P-201ENST00000485915 303 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 RPL21P42-201ENST00000488408 464 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 RPL10P7-201ENST00000495649 625 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 PSMA2P2-201ENST00000504319 686 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC017007.1-201ENST00000511960 415 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.64□□□□□ -1.51
SCN1BQ07699 AC117525.1-201ENST00000515228 503 ntBASIC5.64□□□□□ -1.51
SCN1BQ07699 SNORA70.17-201ENST00000516449 133 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms