Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.09□□□□□ -1.11
CALD1Q05682 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.09□□□□□ -1.11
CALD1Q05682 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.09□□□□□ -1.11
CALD1Q05682 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8.09□□□□□ -1.11
CALD1Q05682 AC097641.3-201ENST00000613523 464 ntBASIC8.09□□□□□ -1.11
CALD1Q05682 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CALD1Q05682 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CALD1Q05682 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CALD1Q05682 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.09□□□□□ -1.11
CALD1Q05682 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CALD1Q05682 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.09□□□□□ -1.11
CALD1Q05682 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CALD1Q05682 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CALD1Q05682 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CALD1Q05682 AC027575.3-201ENST00000583058 2747 ntBASIC8.09□□□□□ -1.12
CALD1Q05682 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 RNU1-65P-201ENST00000363919 148 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 SNORA70.9-201ENST00000384370 135 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 AC010740.1-201ENST00000417035 684 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 AL354707.3-201ENST00000427308 331 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.08□□□□□ -1.12
CALD1Q05682 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC8.08□□□□□ -1.12
CALD1Q05682 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC8.08□□□□□ -1.12
CALD1Q05682 RPL17P2-201ENST00000491913 451 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 AC093815.1-201ENST00000508637 280 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC8.08□□□□□ -1.12
CALD1Q05682 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.08□□□□□ -1.12
CALD1Q05682 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CALD1Q05682 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC8.08□□□□□ -1.12
CALD1Q05682 AL845552.1-201ENST00000556820 323 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.08□□□□□ -1.12
CALD1Q05682 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC8.08□□□□□ -1.12
CALD1Q05682 MIR4502-201ENST00000580432 81 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.08□□□□□ -1.12
CALD1Q05682 AC008555.7-201ENST00000605008 583 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 FAM27E2-201ENST00000619668 403 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 AC003992.1-201ENST00000635364 557 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
CALD1Q05682 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 HDAC1P2-201ENST00000453661 1398 ntBASIC8.08□□□□□ -1.12
CALD1Q05682 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CALD1Q05682 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.07□□□□□ -1.12
CALD1Q05682 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CALD1Q05682 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CALD1Q05682 AC096921.2-201ENST00000561507 1916 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 AP001541.1-201ENST00000623322 1904 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
CALD1Q05682 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CALD1Q05682 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.07□□□□□ -1.12
CALD1Q05682 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.07□□□□□ -1.12
CALD1Q05682 RNU6-673P-201ENST00000365084 104 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 RNA5SP156-201ENST00000410250 110 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 RNA5SP115-201ENST00000411160 107 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 HMGA1P8-201ENST00000414130 321 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 RPS7P8-201ENST00000418311 581 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 PSMD10P2-201ENST00000432890 672 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 AC097463.1-201ENST00000447288 481 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.07□□□□□ -1.12
CALD1Q05682 AC084121.1-201ENST00000533882 835 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 AC092865.1-201ENST00000544395 1023 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 OLR1-210ENST00000544577 924 ntTSL 5 BASIC8.07□□□□□ -1.12
CALD1Q05682 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC8.07□□□□□ -1.12
CALD1Q05682 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CALD1Q05682 OR4H6P-201ENST00000563771 921 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 MIR4271-201ENST00000582451 67 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 MIR4420-201ENST00000583944 77 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.07□□□□□ -1.12
CALD1Q05682 AC124916.2-201ENST00000604416 224 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 AP001885.1-201ENST00000621658 558 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.07□□□□□ -1.12
CALD1Q05682 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC8.07□□□□□ -1.12
CALD1Q05682 OR7A1P-202ENST00000641542 1158 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CALD1Q05682 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CALD1Q05682 SHQ1P1-201ENST00000437111 1544 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CALD1Q05682 AC006511.3-201ENST00000624929 1783 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CALD1Q05682 HSPD1P9-201ENST00000420325 1636 ntBASIC8.07□□□□□ -1.12
CALD1Q05682 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CALD1Q05682 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CALD1Q05682 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CALD1Q05682 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CALD1Q05682 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.06□□□□□ -1.12
CALD1Q05682 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.06□□□□□ -1.12
CALD1Q05682 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CALD1Q05682 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.06□□□□□ -1.12
CALD1Q05682 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CALD1Q05682 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.06□□□□□ -1.12
CALD1Q05682 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CALD1Q05682 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CALD1Q05682 SNORA21-201ENST00000362423 132 ntBASIC8.06□□□□□ -1.12
CALD1Q05682 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms