Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP1Q04837 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP1Q04837 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
SSBP1Q04837 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP1Q04837 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP1Q04837 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP1Q04837 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP1Q04837 AC123769.1-201ENST00000530992 3192 ntBASIC5.08□□□□□ -1.6
SSBP1Q04837 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP1Q04837 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 AL161912.4-201ENST00000623889 2468 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 AC004158.1-201ENST00000564508 4319 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSBP1Q04837 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP1Q04837 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 RNA5SP301-201ENST00000362537 121 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 RNA5SP211-201ENST00000365516 117 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP1Q04837 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 VN1R21P-201ENST00000426703 765 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP1Q04837 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP1Q04837 AL512593.1-201ENST00000444758 779 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.07□□□□□ -1.6
SSBP1Q04837 SDC4P-201ENST00000453285 601 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 OR4D12P-201ENST00000509361 911 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 GAPDHP62-201ENST00000515313 990 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 AP006437.1-202ENST00000530327 933 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP1Q04837 AC126323.4-201ENST00000566935 234 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 RN7SL426P-201ENST00000579106 295 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP1Q04837 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.07□□□□□ -1.6
SSBP1Q04837 MIR6133-201ENST00000617057 108 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 AL445670.1-201ENST00000618889 801 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.07□□□□□ -1.6
SSBP1Q04837 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.07□□□□□ -1.6
SSBP1Q04837 AL022311.1-201ENST00000623726 19416 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SSBP1Q04837 AC130360.2-201ENST00000533477 1556 ntBASIC5.07□□□□□ -1.6
SSBP1Q04837 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSBP1Q04837 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.07□□□□□ -1.6
SSBP1Q04837 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SSBP1Q04837 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP1Q04837 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSBP1Q04837 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
SSBP1Q04837 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 AP001029.2-203ENST00000589795 4910 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC121334.1-201ENST00000396414 802 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 GPS2P1-201ENST00000411761 986 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 RPL21P50-201ENST00000417698 477 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 OR10T1P-201ENST00000424327 947 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP1Q04837 GYG1P2-201ENST00000426437 1006 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP1Q04837 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSBP1Q04837 RPL12P24-201ENST00000474907 486 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 PFN1P6-201ENST00000476786 399 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 AC106760.2-201ENST00000504159 619 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP1Q04837 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.06□□□□□ -1.6
SSBP1Q04837 Y_RNA.710-201ENST00000516975 110 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.06□□□□□ -1.6
SSBP1Q04837 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP1Q04837 RN7SL131P-201ENST00000579043 256 ntBASIC5.06□□□□□ -1.6
SSBP1Q04837 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.06□□□□□ -1.6
SSBP1Q04837 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms