Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC118465.1-201ENST00000513820 1271 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 IGKV1D-32-201ENST00000517449 318 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.09□□□□□ -1.43
CLRN1P58418 HAUS1P3-201ENST00000523909 662 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC007834.2-201ENST00000536310 343 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.09□□□□□ -1.43
CLRN1P58418 TDGP1-201ENST00000543961 1229 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.09□□□□□ -1.43
CLRN1P58418 AL135978.1-201ENST00000553618 1266 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 RN7SL42P-201ENST00000579786 294 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC020765.1-201ENST00000604296 328 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC012511.1-201ENST00000608140 449 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 AC245100.7-201ENST00000609678 442 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 VN1R9P-201ENST00000614184 867 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC007347.2-201ENST00000623044 180 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 AC140479.4-205ENST00000636339 820 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 AC243725.1-201ENST00000637164 436 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLRN1P58418 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.09□□□□□ -1.43
CLRN1P58418 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 UGT2B24P-201ENST00000514441 1597 ntBASIC6.09□□□□□ -1.43
CLRN1P58418 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.09□□□□□ -1.43
CLRN1P58418 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLRN1P58418 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.09□□□□□ -1.44
CLRN1P58418 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CLRN1P58418 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.09□□□□□ -1.44
CLRN1P58418 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
CLRN1P58418 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 AC099786.3-201ENST00000565735 1410 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 MTCO1P25-201ENST00000414449 1799 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CLRN1P58418 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.08□□□□□ -1.44
CLRN1P58418 AL449283.1-202ENST00000418249 604 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLRN1P58418 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.08□□□□□ -1.44
CLRN1P58418 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CLRN1P58418 PUDPP2-201ENST00000431423 643 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.08□□□□□ -1.44
CLRN1P58418 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.08□□□□□ -1.44
CLRN1P58418 CBX5P1-201ENST00000468470 561 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC083806.1-201ENST00000468934 316 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.08□□□□□ -1.44
CLRN1P58418 SYT14P1-201ENST00000481459 721 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AF305872.1-201ENST00000485217 471 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 RPL21P42-201ENST00000488408 464 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.08□□□□□ -1.44
CLRN1P58418 OR51A1P-201ENST00000511110 946 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 GAPDHP71-201ENST00000511530 1003 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.08□□□□□ -1.44
CLRN1P58418 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.08□□□□□ -1.44
CLRN1P58418 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.08□□□□□ -1.44
CLRN1P58418 MIR4800-201ENST00000537353 80 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.08□□□□□ -1.44
CLRN1P58418 DPPA3P2-201ENST00000553589 478 ntBASIC6.08□□□□□ -1.44
CLRN1P58418 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms