Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIM2P55344 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIM2P55344 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.8□□□□□ -1.48
LIM2P55344 SNORA21-201ENST00000362423 132 ntBASIC5.8□□□□□ -1.48
LIM2P55344 GCNT1P4-201ENST00000404096 329 ntBASIC5.8□□□□□ -1.48
LIM2P55344 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.8□□□□□ -1.48
LIM2P55344 AC015977.1-201ENST00000418887 292 ntBASIC5.8□□□□□ -1.48
LIM2P55344 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.8□□□□□ -1.48
LIM2P55344 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 BX679664.2-201ENST00000439282 283 ntBASIC5.8□□□□□ -1.48
LIM2P55344 RPL5P7-201ENST00000444235 813 ntBASIC5.8□□□□□ -1.48
LIM2P55344 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.8□□□□□ -1.48
LIM2P55344 AC093166.3-201ENST00000448785 303 ntBASIC5.8□□□□□ -1.48
LIM2P55344 AC002553.3-201ENST00000453002 341 ntBASIC5.8□□□□□ -1.48
LIM2P55344 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 AC118758.1-202ENST00000454719 225 ntBASIC5.8□□□□□ -1.48
LIM2P55344 RPL7L1P3-201ENST00000455249 689 ntBASIC5.8□□□□□ -1.48
LIM2P55344 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.8□□□□□ -1.48
LIM2P55344 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.8□□□□□ -1.48
LIM2P55344 AC008945.1-201ENST00000505144 499 ntBASIC5.8□□□□□ -1.48
LIM2P55344 OR7E99P-201ENST00000505750 922 ntBASIC5.8□□□□□ -1.48
LIM2P55344 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.8□□□□□ -1.48
LIM2P55344 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 RN7SKP67-201ENST00000515905 235 ntBASIC5.8□□□□□ -1.48
LIM2P55344 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIM2P55344 AC002519.2-203ENST00000567043 837 ntBASIC5.8□□□□□ -1.48
LIM2P55344 MIR4502-201ENST00000580432 81 ntBASIC5.8□□□□□ -1.48
LIM2P55344 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.8□□□□□ -1.48
LIM2P55344 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.8□□□□□ -1.48
LIM2P55344 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.8□□□□□ -1.48
LIM2P55344 AC073389.3-201ENST00000609434 935 ntBASIC5.8□□□□□ -1.48
LIM2P55344 RN7SL261P-201ENST00000613441 282 ntBASIC5.8□□□□□ -1.48
LIM2P55344 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.8□□□□□ -1.48
LIM2P55344 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.8□□□□□ -1.48
LIM2P55344 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIM2P55344 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LIM2P55344 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LIM2P55344 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIM2P55344 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LIM2P55344 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIM2P55344 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
LIM2P55344 AL022323.4-201ENST00000623980 13120 ntBASIC5.79□□□□□ -1.48
LIM2P55344 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LIM2P55344 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.79□□□□□ -1.48
LIM2P55344 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LIM2P55344 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.79□□□□□ -1.48
LIM2P55344 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 AC007159.1-201ENST00000566529 4706 ntBASIC5.79□□□□□ -1.48
LIM2P55344 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 RNA5SP375-201ENST00000362975 119 ntBASIC5.79□□□□□ -1.48
LIM2P55344 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 AL121835.1-201ENST00000404250 354 ntBASIC5.79□□□□□ -1.48
LIM2P55344 RN7SKP151-201ENST00000410230 316 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 RPS26P38-201ENST00000414476 348 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AC130360.1-201ENST00000425489 1117 ntBASIC5.79□□□□□ -1.48
LIM2P55344 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.79□□□□□ -1.48
LIM2P55344 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.79□□□□□ -1.48
LIM2P55344 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 OR52I1-201ENST00000450052 1050 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AL445687.2-201ENST00000458156 728 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AC114982.2-201ENST00000461396 358 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AL035690.1-201ENST00000490892 383 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.79□□□□□ -1.48
LIM2P55344 CR383658.1-201ENST00000514609 734 ntBASIC5.79□□□□□ -1.48
LIM2P55344 HSD3BP3-201ENST00000514706 994 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 AC130365.2-201ENST00000525882 1201 ntBASIC5.79□□□□□ -1.48
LIM2P55344 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.79□□□□□ -1.48
LIM2P55344 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.79□□□□□ -1.48
LIM2P55344 GLYATL1P2-202ENST00000588046 902 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AC027334.1-201ENST00000603257 310 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AC124916.2-201ENST00000604416 224 ntBASIC5.79□□□□□ -1.48
LIM2P55344 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.79□□□□□ -1.48
LIM2P55344 AL591926.1-201ENST00000620542 217 ntBASIC5.79□□□□□ -1.48
LIM2P55344 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.79□□□□□ -1.48
LIM2P55344 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LIM2P55344 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.79□□□□□ -1.48
LIM2P55344 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIM2P55344 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
LIM2P55344 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.78□□□□□ -1.48
LIM2P55344 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.78□□□□□ -1.48
LIM2P55344 SNX18P3-202ENST00000565670 1750 ntBASIC5.78□□□□□ -1.48
LIM2P55344 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms