Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZNF658B-201ENST00000602828 3408 ntBASIC6.37□□□□□ -1.39
CDH6P55285 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH6P55285 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH6P55285 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CDH6P55285 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH6P55285 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 BX284613.1-201ENST00000452221 1641 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AC130360.2-201ENST00000533477 1556 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDH6P55285 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDH6P55285 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH6P55285 MIR188-201ENST00000385034 86 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 THEM7P-201ENST00000419556 672 ntBASIC6.36□□□□□ -1.39
CDH6P55285 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 RPSAP32-201ENST00000432681 526 ntBASIC6.36□□□□□ -1.39
CDH6P55285 PSMD10P2-201ENST00000432890 672 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AC096632.2-201ENST00000438139 1239 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH6P55285 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH6P55285 RN7SL352P-201ENST00000466002 277 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AC005017.1-201ENST00000482002 490 ntBASIC6.36□□□□□ -1.39
CDH6P55285 RPL9P15-201ENST00000491096 532 ntBASIC6.36□□□□□ -1.39
CDH6P55285 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 AC090958.1-201ENST00000511122 351 ntBASIC6.36□□□□□ -1.39
CDH6P55285 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH6P55285 TPM3P3-201ENST00000521343 354 ntBASIC6.36□□□□□ -1.39
CDH6P55285 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CDH6P55285 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH6P55285 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 BMS1P16-201ENST00000556075 1147 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH6P55285 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.36□□□□□ -1.39
CDH6P55285 AC138207.8-204ENST00000579588 527 ntBASIC6.36□□□□□ -1.39
CDH6P55285 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.36□□□□□ -1.39
CDH6P55285 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH6P55285 AC244100.4-201ENST00000617747 388 ntBASIC6.36□□□□□ -1.39
CDH6P55285 AC016542.2-201ENST00000624201 619 ntBASIC6.36□□□□□ -1.39
CDH6P55285 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.36□□□□□ -1.39
CDH6P55285 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.36□□□□□ -1.39
CDH6P55285 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CDH6P55285 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH6P55285 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH6P55285 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDH6P55285 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.36□□□□□ -1.39
CDH6P55285 AP004289.1-201ENST00000436307 2205 ntBASIC6.35□□□□□ -1.39
CDH6P55285 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH6P55285 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDH6P55285 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CDH6P55285 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH6P55285 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH6P55285 RPL7AP14-201ENST00000424041 802 ntBASIC6.35□□□□□ -1.39
CDH6P55285 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.35□□□□□ -1.39
CDH6P55285 AL731534.1-201ENST00000434711 269 ntBASIC6.35□□□□□ -1.39
CDH6P55285 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.35□□□□□ -1.39
CDH6P55285 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH6P55285 OR7E22P-201ENST00000478335 1035 ntBASIC6.35□□□□□ -1.39
CDH6P55285 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH6P55285 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH6P55285 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH6P55285 AC021269.1-201ENST00000526860 705 ntBASIC6.35□□□□□ -1.39
CDH6P55285 NPIPB14P-203ENST00000532298 987 ntBASIC6.35□□□□□ -1.39
CDH6P55285 OR4A41P-201ENST00000533053 928 ntBASIC6.35□□□□□ -1.39
CDH6P55285 AC121758.1-202ENST00000556917 658 ntBASIC6.35□□□□□ -1.39
CDH6P55285 AP005136.2-201ENST00000583253 1049 ntBASIC6.35□□□□□ -1.39
CDH6P55285 AL352984.2-201ENST00000611153 546 ntBASIC6.35□□□□□ -1.39
CDH6P55285 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH6P55285 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDH6P55285 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CDH6P55285 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH6P55285 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH6P55285 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH6P55285 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH6P55285 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
CDH6P55285 AC022164.1-201ENST00000568767 2673 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms