Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL606490.7-201ENST00000433136 191 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.19□□□□□ -1.42
NR1H2P55055 RPL12P49-201ENST00000441100 121 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 VN1R48P-201ENST00000448149 1036 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 AL157884.3-201ENST00000448273 1184 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 GOT2P2-201ENST00000450663 1251 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC079193.1-201ENST00000460497 588 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 EIF2S2P4-201ENST00000461070 984 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 OR9A1P-202ENST00000484361 945 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
NR1H2P55055 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.19□□□□□ -1.42
NR1H2P55055 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.19□□□□□ -1.42
NR1H2P55055 AP001267.4-201ENST00000602598 545 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 AC019257.2-201ENST00000605539 497 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 AC024589.2-201ENST00000605642 1294 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NR1H2P55055 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 AL161420.1-201ENST00000619393 264 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 AC073592.7-201ENST00000623659 507 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.19□□□□□ -1.42
NR1H2P55055 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 AC087516.1-201ENST00000561236 2428 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 AC123769.1-201ENST00000530992 3192 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NR1H2P55055 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.19□□□□□ -1.42
NR1H2P55055 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 AC005725.1-201ENST00000577346 2607 ntBASIC6.19□□□□□ -1.42
NR1H2P55055 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NR1H2P55055 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
NR1H2P55055 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.18□□□□□ -1.42
NR1H2P55055 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NR1H2P55055 AC011815.2-201ENST00000618230 2021 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.18□□□□□ -1.42
NR1H2P55055 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.18□□□□□ -1.42
NR1H2P55055 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.18□□□□□ -1.42
NR1H2P55055 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NR1H2P55055 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.18□□□□□ -1.42
NR1H2P55055 MIR99A-201ENST00000384906 81 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 ARSFP1-201ENST00000398758 477 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 RN7SKP148-201ENST00000410179 275 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 RN7SKP254-201ENST00000410685 310 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 RNU2-18P-201ENST00000411224 162 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 USP9YP19-201ENST00000412165 485 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.18□□□□□ -1.42
NR1H2P55055 RPL24P2-201ENST00000421023 475 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 OR5W1P-201ENST00000423705 938 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 MTATP6P11-201ENST00000428071 670 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.18□□□□□ -1.42
NR1H2P55055 ZFAND6P1-201ENST00000434138 605 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AC083855.1-201ENST00000440041 258 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 BX005266.3-201ENST00000443013 1075 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 RN7SL836P-201ENST00000476140 296 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AC083906.1-201ENST00000509298 406 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
NR1H2P55055 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.18□□□□□ -1.42
NR1H2P55055 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.18□□□□□ -1.42
NR1H2P55055 OR10D4P-201ENST00000525892 951 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.18□□□□□ -1.42
NR1H2P55055 AC024267.2-201ENST00000582737 417 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AP002884.5-201ENST00000595053 1132 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.18□□□□□ -1.42
NR1H2P55055 AC073333.2-201ENST00000603589 769 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.18□□□□□ -1.42
NR1H2P55055 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 AC105105.5-201ENST00000622635 1294 ntBASIC6.18□□□□□ -1.42
NR1H2P55055 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NR1H2P55055 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NR1H2P55055 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.18□□□□□ -1.42
NR1H2P55055 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NR1H2P55055 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NR1H2P55055 AC020658.2-201ENST00000559030 4020 ntBASIC6.17□□□□□ -1.42
NR1H2P55055 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NR1H2P55055 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NR1H2P55055 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms