Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP333-201ENST00000363466 118 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 RNA5SP334-201ENST00000364825 118 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 AL096829.1-201ENST00000413677 457 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 NAP1L4P2-201ENST00000425958 899 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AL451136.1-201ENST00000435399 325 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.77□□□□□ -1.33
CLCN3P51790 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.77□□□□□ -1.33
CLCN3P51790 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.77□□□□□ -1.33
CLCN3P51790 AC114781.3-201ENST00000512083 142 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 RNA5SP438-201ENST00000516561 112 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 AP003396.4-201ENST00000527574 265 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.77□□□□□ -1.33
CLCN3P51790 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.77□□□□□ -1.33
CLCN3P51790 NPIPB1P-202ENST00000588786 828 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.77□□□□□ -1.33
CLCN3P51790 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AC027243.2-201ENST00000602530 724 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AC079791.1-201ENST00000605356 973 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AL645933.2-201ENST00000606743 1207 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AL136228.1-201ENST00000622221 319 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AC129778.1-202ENST00000623812 261 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.77□□□□□ -1.33
CLCN3P51790 AL355480.1-201ENST00000629041 99 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AL591379.1-207ENST00000635982 261 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 HDAC1P2-201ENST00000453661 1398 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 AC011815.2-201ENST00000618230 2021 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 AC011369.2-201ENST00000624423 1567 ntBASIC6.77□□□□□ -1.33
CLCN3P51790 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CLCN3P51790 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CLCN3P51790 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CLCN3P51790 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CLCN3P51790 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CLCN3P51790 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CLCN3P51790 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.76□□□□□ -1.33
CLCN3P51790 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CLCN3P51790 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 AL354890.1-201ENST00000413730 346 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 NFYAP1-201ENST00000431953 972 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.76□□□□□ -1.33
CLCN3P51790 AL512593.1-201ENST00000444758 779 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.76□□□□□ -1.33
CLCN3P51790 CFL1P4-201ENST00000451536 498 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 RPS27AP3-201ENST00000453803 454 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.76□□□□□ -1.33
CLCN3P51790 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.76□□□□□ -1.33
CLCN3P51790 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.76□□□□□ -1.33
CLCN3P51790 AP004607.6-201ENST00000525033 1202 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.76□□□□□ -1.33
CLCN3P51790 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.76□□□□□ -1.33
CLCN3P51790 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.76□□□□□ -1.33
CLCN3P51790 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.76□□□□□ -1.33
CLCN3P51790 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.76□□□□□ -1.33
CLCN3P51790 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.76□□□□□ -1.33
CLCN3P51790 AC016590.3-201ENST00000611171 753 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.76□□□□□ -1.33
CLCN3P51790 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.76□□□□□ -1.33
CLCN3P51790 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLCN3P51790 CASC19-243ENST00000641588 1546 ntBASIC6.76□□□□□ -1.33
CLCN3P51790 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CLCN3P51790 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLCN3P51790 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLCN3P51790 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.75□□□□□ -1.33
CLCN3P51790 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
CLCN3P51790 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.75□□□□□ -1.33
CLCN3P51790 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLCN3P51790 AF287957.1-201ENST00000607368 1595 ntBASIC6.75□□□□□ -1.33
CLCN3P51790 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
CLCN3P51790 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CLCN3P51790 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.75□□□□□ -1.33
CLCN3P51790 SNORA81-201ENST00000408493 178 ntBASIC6.75□□□□□ -1.33
CLCN3P51790 SLC20A1P1-201ENST00000413906 956 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms