Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL606495.1-201ENST00000422100 813 ntBASIC7.82□□□□□ -1.16
USP11P51784 AC008753.1-201ENST00000423096 284 ntBASIC7.82□□□□□ -1.16
USP11P51784 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC7.82□□□□□ -1.16
USP11P51784 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 GAPDHP75-201ENST00000433910 943 ntBASIC7.82□□□□□ -1.16
USP11P51784 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.82□□□□□ -1.16
USP11P51784 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 AL390728.3-201ENST00000452704 270 ntBASIC7.82□□□□□ -1.16
USP11P51784 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC7.82□□□□□ -1.16
USP11P51784 AP002371.1-201ENST00000463604 433 ntBASIC7.82□□□□□ -1.16
USP11P51784 RN7SL390P-201ENST00000470634 284 ntBASIC7.82□□□□□ -1.16
USP11P51784 UOX-201ENST00000471089 899 ntBASIC7.82□□□□□ -1.16
USP11P51784 PGBD4P1-201ENST00000473644 407 ntBASIC7.82□□□□□ -1.16
USP11P51784 RN7SL259P-201ENST00000478499 253 ntBASIC7.82□□□□□ -1.16
USP11P51784 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.82□□□□□ -1.16
USP11P51784 HMGN1P17-201ENST00000513734 295 ntBASIC7.82□□□□□ -1.16
USP11P51784 SCARNA11.1-201ENST00000516918 132 ntBASIC7.82□□□□□ -1.16
USP11P51784 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.82□□□□□ -1.16
USP11P51784 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 OR7E10P-201ENST00000526420 991 ntBASIC7.82□□□□□ -1.16
USP11P51784 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.82□□□□□ -1.16
USP11P51784 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.82□□□□□ -1.16
USP11P51784 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.82□□□□□ -1.16
USP11P51784 AL109628.1-201ENST00000556877 366 ntBASIC7.82□□□□□ -1.16
USP11P51784 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.82□□□□□ -1.16
USP11P51784 RN7SL32P-201ENST00000580514 281 ntBASIC7.82□□□□□ -1.16
USP11P51784 EIF1P5-201ENST00000585002 234 ntBASIC7.82□□□□□ -1.16
USP11P51784 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.82□□□□□ -1.16
USP11P51784 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.82□□□□□ -1.16
USP11P51784 AL035410.2-201ENST00000604963 864 ntBASIC7.82□□□□□ -1.16
USP11P51784 AL357078.3-201ENST00000607528 618 ntBASIC7.82□□□□□ -1.16
USP11P51784 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.82□□□□□ -1.16
USP11P51784 AC116165.2-201ENST00000616705 206 ntBASIC7.82□□□□□ -1.16
USP11P51784 AL121890.3-201ENST00000618494 516 ntBASIC7.82□□□□□ -1.16
USP11P51784 MRPL57P3-201ENST00000619218 176 ntBASIC7.82□□□□□ -1.16
USP11P51784 AC093875.1-201ENST00000623688 504 ntBASIC7.82□□□□□ -1.16
USP11P51784 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.82□□□□□ -1.16
USP11P51784 CASC19-238ENST00000641523 1558 ntBASIC7.82□□□□□ -1.16
USP11P51784 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
USP11P51784 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.82□□□□□ -1.16
USP11P51784 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
USP11P51784 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.82□□□□□ -1.16
USP11P51784 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.82□□□□□ -1.16
USP11P51784 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.82□□□□□ -1.16
USP11P51784 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USP11P51784 ENO1P4-201ENST00000416471 1785 ntBASIC7.82□□□□□ -1.16
USP11P51784 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 RNU4-75P-201ENST00000364621 146 ntBASIC7.81□□□□□ -1.16
USP11P51784 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 AL445213.1-201ENST00000412589 747 ntBASIC7.81□□□□□ -1.16
USP11P51784 LINC01881-201ENST00000416103 412 ntBASIC7.81□□□□□ -1.16
USP11P51784 RPL18AP14-201ENST00000417685 526 ntBASIC7.81□□□□□ -1.16
USP11P51784 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.81□□□□□ -1.16
USP11P51784 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.81□□□□□ -1.16
USP11P51784 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 RBMY3AP-201ENST00000449381 1145 ntBASIC7.81□□□□□ -1.16
USP11P51784 HMGB1P26-201ENST00000452520 628 ntBASIC7.81□□□□□ -1.16
USP11P51784 MEF2AP1-201ENST00000454867 863 ntBASIC7.81□□□□□ -1.16
USP11P51784 MTCO2P18-201ENST00000457151 658 ntBASIC7.81□□□□□ -1.16
USP11P51784 RPL21P18-201ENST00000469899 480 ntBASIC7.81□□□□□ -1.16
USP11P51784 AC020779.1-201ENST00000478757 796 ntBASIC7.81□□□□□ -1.16
USP11P51784 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 AC104685.1-201ENST00000502445 371 ntBASIC7.81□□□□□ -1.16
USP11P51784 AC021220.1-201ENST00000507445 630 ntBASIC7.81□□□□□ -1.16
USP11P51784 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 MTCO3P7-201ENST00000510008 774 ntBASIC7.81□□□□□ -1.16
USP11P51784 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.81□□□□□ -1.16
USP11P51784 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.81□□□□□ -1.16
USP11P51784 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.81□□□□□ -1.16
USP11P51784 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.81□□□□□ -1.16
USP11P51784 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USP11P51784 OR9L1P-201ENST00000529493 933 ntBASIC7.81□□□□□ -1.16
USP11P51784 AP006587.5-201ENST00000532033 739 ntBASIC7.81□□□□□ -1.16
USP11P51784 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.81□□□□□ -1.16
USP11P51784 AL591767.3-201ENST00000554632 525 ntBASIC7.81□□□□□ -1.16
USP11P51784 PPIAP6-201ENST00000557078 499 ntBASIC7.81□□□□□ -1.16
USP11P51784 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms