Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 RPL35AP31-201ENST00000418340 337 ntBASIC6.63□□□□□ -1.35
CASP4P49662 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 RPL23AP60-201ENST00000450011 454 ntBASIC6.63□□□□□ -1.35
CASP4P49662 HMGB1P7-201ENST00000450921 612 ntBASIC6.63□□□□□ -1.35
CASP4P49662 PPIAP7-201ENST00000454070 489 ntBASIC6.63□□□□□ -1.35
CASP4P49662 RAB28P2-201ENST00000454299 641 ntBASIC6.63□□□□□ -1.35
CASP4P49662 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 RN7SL254P-201ENST00000460609 284 ntBASIC6.63□□□□□ -1.35
CASP4P49662 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.63□□□□□ -1.35
CASP4P49662 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.63□□□□□ -1.35
CASP4P49662 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.63□□□□□ -1.35
CASP4P49662 AC108103.1-201ENST00000511286 446 ntBASIC6.63□□□□□ -1.35
CASP4P49662 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.63□□□□□ -1.35
CASP4P49662 HSD3BP3-201ENST00000514706 994 ntBASIC6.63□□□□□ -1.35
CASP4P49662 AC008429.4-201ENST00000521201 182 ntBASIC6.63□□□□□ -1.35
CASP4P49662 AP000620.1-201ENST00000527147 504 ntBASIC6.63□□□□□ -1.35
CASP4P49662 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.63□□□□□ -1.35
CASP4P49662 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.63□□□□□ -1.35
CASP4P49662 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.63□□□□□ -1.35
CASP4P49662 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.63□□□□□ -1.35
CASP4P49662 AC007346.1-201ENST00000569208 867 ntBASIC6.63□□□□□ -1.35
CASP4P49662 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.63□□□□□ -1.35
CASP4P49662 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.63□□□□□ -1.35
CASP4P49662 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.63□□□□□ -1.35
CASP4P49662 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.63□□□□□ -1.35
CASP4P49662 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
CASP4P49662 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CASP4P49662 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.63□□□□□ -1.35
CASP4P49662 AC016583.1-201ENST00000624221 2431 ntBASIC6.62□□□□□ -1.35
CASP4P49662 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CASP4P49662 AL731532.1-201ENST00000623972 4236 ntBASIC6.62□□□□□ -1.35
CASP4P49662 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CASP4P49662 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CASP4P49662 AL354854.1-201ENST00000455940 1363 ntBASIC6.62□□□□□ -1.35
CASP4P49662 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CASP4P49662 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.62□□□□□ -1.35
CASP4P49662 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.62□□□□□ -1.35
CASP4P49662 CLNS1AP1-201ENST00000435954 682 ntBASIC6.62□□□□□ -1.35
CASP4P49662 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.62□□□□□ -1.35
CASP4P49662 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 OR51A1P-201ENST00000511110 946 ntBASIC6.62□□□□□ -1.35
CASP4P49662 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.62□□□□□ -1.35
CASP4P49662 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CASP4P49662 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.62□□□□□ -1.35
CASP4P49662 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 AC119403.2-201ENST00000590960 598 ntBASIC6.62□□□□□ -1.35
CASP4P49662 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 uc_338.26-201ENST00000612659 160 ntBASIC6.62□□□□□ -1.35
CASP4P49662 AC096861.1-201ENST00000616652 240 ntBASIC6.62□□□□□ -1.35
CASP4P49662 AP003789.1-201ENST00000617737 605 ntBASIC6.62□□□□□ -1.35
CASP4P49662 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CASP4P49662 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CASP4P49662 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CASP4P49662 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CASP4P49662 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CASP4P49662 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.61□□□□□ -1.35
CASP4P49662 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.61□□□□□ -1.35
CASP4P49662 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CASP4P49662 PSG10P-201ENST00000501199 1500 ntBASIC6.61□□□□□ -1.35
CASP4P49662 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.61□□□□□ -1.35
CASP4P49662 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.61□□□□□ -1.35
CASP4P49662 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.61□□□□□ -1.35
CASP4P49662 RNU1-134P-201ENST00000362935 165 ntBASIC6.61□□□□□ -1.35
CASP4P49662 RNU1-65P-201ENST00000363919 148 ntBASIC6.61□□□□□ -1.35
CASP4P49662 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
CASP4P49662 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.61□□□□□ -1.35
CASP4P49662 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.61□□□□□ -1.35
CASP4P49662 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.61□□□□□ -1.35
CASP4P49662 IGLV3-4-201ENST00000432300 244 ntBASIC6.61□□□□□ -1.35
CASP4P49662 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.61□□□□□ -1.35
CASP4P49662 AL353662.1-201ENST00000439099 327 ntBASIC6.61□□□□□ -1.35
CASP4P49662 SEPT14P12-201ENST00000442280 560 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms