Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RPA3P35244 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.16□□□□□ -1.42
RPA3P35244 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.15□□□□□ -1.42
RPA3P35244 AL136984.1-201ENST00000607611 1893 ntBASIC6.15□□□□□ -1.42
RPA3P35244 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RPA3P35244 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
RPA3P35244 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.15□□□□□ -1.42
RPA3P35244 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RPA3P35244 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RPA3P35244 RPL11P4-201ENST00000332269 436 ntBASIC6.15□□□□□ -1.42
RPA3P35244 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RPA3P35244 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.15□□□□□ -1.42
RPA3P35244 SNORA43.1-201ENST00000364863 140 ntBASIC6.15□□□□□ -1.42
RPA3P35244 RNA5SP77-201ENST00000365394 120 ntBASIC6.15□□□□□ -1.42
RPA3P35244 SNORA77.2-201ENST00000408571 112 ntBASIC6.15□□□□□ -1.42
RPA3P35244 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RPA3P35244 RN7SKP17-201ENST00000411242 351 ntBASIC6.15□□□□□ -1.42
RPA3P35244 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.15□□□□□ -1.42
RPA3P35244 OSTCP4-201ENST00000424397 449 ntBASIC6.15□□□□□ -1.42
RPA3P35244 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.15□□□□□ -1.42
RPA3P35244 AC073410.1-201ENST00000435125 589 ntBASIC6.15□□□□□ -1.42
RPA3P35244 OR2L9P-201ENST00000444456 913 ntBASIC6.15□□□□□ -1.42
RPA3P35244 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RPA3P35244 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 RAB28P2-201ENST00000454299 641 ntBASIC6.15□□□□□ -1.42
RPA3P35244 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.15□□□□□ -1.42
RPA3P35244 RPL29P23-201ENST00000486188 442 ntBASIC6.15□□□□□ -1.42
RPA3P35244 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 TOMM22P4-201ENST00000511318 336 ntBASIC6.15□□□□□ -1.42
RPA3P35244 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.15□□□□□ -1.42
RPA3P35244 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RPA3P35244 AC092865.1-201ENST00000544395 1023 ntBASIC6.15□□□□□ -1.42
RPA3P35244 RNU4ATAC-201ENST00000580972 127 ntBASIC6.15□□□□□ -1.42
RPA3P35244 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.15□□□□□ -1.42
RPA3P35244 AC048341.3-201ENST00000619323 491 ntBASIC6.15□□□□□ -1.42
RPA3P35244 AL137067.2-201ENST00000621202 131 ntBASIC6.15□□□□□ -1.42
RPA3P35244 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RPA3P35244 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RPA3P35244 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
RPA3P35244 AC013268.3-201ENST00000262716 2324 ntBASIC6.15□□□□□ -1.43
RPA3P35244 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RPA3P35244 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RPA3P35244 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RPA3P35244 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 AL161756.3-201ENST00000641216 2071 ntBASIC6.14□□□□□ -1.43
RPA3P35244 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.14□□□□□ -1.43
RPA3P35244 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 AL049634.1-201ENST00000453770 1720 ntBASIC6.14□□□□□ -1.43
RPA3P35244 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RPA3P35244 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RPA3P35244 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RPA3P35244 AC121334.1-201ENST00000396414 802 ntBASIC6.14□□□□□ -1.43
RPA3P35244 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 FAM183DP-201ENST00000421987 399 ntBASIC6.14□□□□□ -1.43
RPA3P35244 RPL7AP51-201ENST00000422016 760 ntBASIC6.14□□□□□ -1.43
RPA3P35244 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.14□□□□□ -1.43
RPA3P35244 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 AC096632.2-201ENST00000438139 1239 ntBASIC6.14□□□□□ -1.43
RPA3P35244 KRT8P51-201ENST00000438938 274 ntBASIC6.14□□□□□ -1.43
RPA3P35244 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.14□□□□□ -1.43
RPA3P35244 OSTCP1-201ENST00000455507 450 ntBASIC6.14□□□□□ -1.43
RPA3P35244 RN7SL643P-201ENST00000471845 291 ntBASIC6.14□□□□□ -1.43
RPA3P35244 RN7SL369P-201ENST00000477138 299 ntBASIC6.14□□□□□ -1.43
RPA3P35244 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 TRBV5-2-201ENST00000489095 273 ntBASIC6.14□□□□□ -1.43
RPA3P35244 AC093815.1-201ENST00000508637 280 ntBASIC6.14□□□□□ -1.43
RPA3P35244 ST13P12-201ENST00000508958 1094 ntBASIC6.14□□□□□ -1.43
RPA3P35244 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.14□□□□□ -1.43
RPA3P35244 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.14□□□□□ -1.43
RPA3P35244 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.14□□□□□ -1.43
RPA3P35244 IGHV4-55-201ENST00000520889 368 ntBASIC6.14□□□□□ -1.43
RPA3P35244 TPM3P3-201ENST00000521343 354 ntBASIC6.14□□□□□ -1.43
RPA3P35244 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 AP001000.1-201ENST00000526843 742 ntBASIC6.14□□□□□ -1.43
RPA3P35244 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.14□□□□□ -1.43
RPA3P35244 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.14□□□□□ -1.43
RPA3P35244 MT1CP-201ENST00000567054 174 ntBASIC6.14□□□□□ -1.43
RPA3P35244 AC025857.2-201ENST00000602711 238 ntBASIC6.14□□□□□ -1.43
RPA3P35244 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.14□□□□□ -1.43
RPA3P35244 AC012676.3-201ENST00000614983 479 ntBASIC6.14□□□□□ -1.43
RPA3P35244 AL031658.2-201ENST00000616850 651 ntBASIC6.14□□□□□ -1.43
RPA3P35244 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RPA3P35244 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
RPA3P35244 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms