Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXA9P31269 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXA9P31269 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HOXA9P31269 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXA9P31269 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXA9P31269 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 RNU1-150P-201ENST00000362491 162 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 RNA5SP478-201ENST00000364657 115 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AC087752.1-201ENST00000391360 558 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXA9P31269 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 AL512605.1-202ENST00000441919 381 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 GAPDHP23-201ENST00000444823 993 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AL359955.2-201ENST00000445380 353 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 RN7SL214P-201ENST00000487317 265 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 SETP21-201ENST00000514799 892 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AC073581.1-201ENST00000519036 575 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 RPA2P3-201ENST00000533268 770 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 AL121579.2-201ENST00000555466 590 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXA9P31269 AC092121.1-201ENST00000569452 202 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 COX6CP7-201ENST00000597056 208 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AC008555.7-201ENST00000605008 583 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AL645933.2-201ENST00000606743 1207 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AL136131.3-201ENST00000607600 188 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 AC079414.3-201ENST00000612986 1090 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
HOXA9P31269 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXA9P31269 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXA9P31269 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HOXA9P31269 AC010168.2-201ENST00000562691 5428 ntBASIC6.47□□□□□ -1.37
HOXA9P31269 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXA9P31269 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXA9P31269 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXA9P31269 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXA9P31269 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.46□□□□□ -1.37
HOXA9P31269 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.46□□□□□ -1.37
HOXA9P31269 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXA9P31269 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HOXA9P31269 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXA9P31269 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 TMSB4XP4-201ENST00000323496 618 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA9P31269 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 SNORA43.1-201ENST00000364863 140 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXA9P31269 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXA9P31269 AL096711.1-201ENST00000404780 554 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 RN7SKP229-201ENST00000410465 302 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA9P31269 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXA9P31269 RPL12P12-201ENST00000424633 501 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 GAPDHP75-201ENST00000433910 943 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXA9P31269 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA9P31269 NDUFS5P5-201ENST00000437256 321 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 AC016908.1-201ENST00000442571 1219 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXA9P31269 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA9P31269 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.46□□□□□ -1.38
HOXA9P31269 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXA9P31269 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXA9P31269 AP004607.6-201ENST00000525033 1202 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 AC015689.2-201ENST00000528172 1738 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXA9P31269 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXA9P31269 AC007448.1-201ENST00000582714 234 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXA9P31269 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXA9P31269 NPIPB1P-202ENST00000588786 828 ntBASIC6.46□□□□□ -1.38
HOXA9P31269 AF287957.1-201ENST00000607368 1595 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms