Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.97□□□□□ -1.13
LIG1P18858 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.96□□□□□ -1.13
LIG1P18858 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.96□□□□□ -1.13
LIG1P18858 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LIG1P18858 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LIG1P18858 AC099786.3-201ENST00000565735 1410 ntBASIC7.96□□□□□ -1.13
LIG1P18858 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
LIG1P18858 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LIG1P18858 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LIG1P18858 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LIG1P18858 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LIG1P18858 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LIG1P18858 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.96□□□□□ -1.14
LIG1P18858 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 AC017079.1-201ENST00000333650 415 ntBASIC7.96□□□□□ -1.14
LIG1P18858 RN7SKP149-201ENST00000363008 344 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC074375.1-201ENST00000372993 192 ntBASIC7.96□□□□□ -1.14
LIG1P18858 RNA5SP35-201ENST00000391257 129 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AL117344.1-201ENST00000407196 616 ntBASIC7.96□□□□□ -1.14
LIG1P18858 SNORA11D-201ENST00000408548 128 ntBASIC7.96□□□□□ -1.14
LIG1P18858 SNORA11E-201ENST00000408778 128 ntBASIC7.96□□□□□ -1.14
LIG1P18858 UBE2V1P9-201ENST00000414760 368 ntBASIC7.96□□□□□ -1.14
LIG1P18858 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
LIG1P18858 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.96□□□□□ -1.14
LIG1P18858 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC134879.1-201ENST00000426062 394 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC009303.1-201ENST00000426307 352 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AL138479.1-201ENST00000426913 484 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AL645936.2-201ENST00000430565 928 ntBASIC7.96□□□□□ -1.14
LIG1P18858 PHB2P1-201ENST00000434943 890 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC7.96□□□□□ -1.14
LIG1P18858 AC011742.2-201ENST00000443818 352 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC044797.1-201ENST00000445744 679 ntBASIC7.96□□□□□ -1.14
LIG1P18858 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC7.96□□□□□ -1.14
LIG1P18858 AC005517.1-201ENST00000452091 489 ntBASIC7.96□□□□□ -1.14
LIG1P18858 OR52Y1P-201ENST00000452418 828 ntBASIC7.96□□□□□ -1.14
LIG1P18858 RPS17P11-201ENST00000474297 293 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC068522.1-201ENST00000482895 345 ntBASIC7.96□□□□□ -1.14
LIG1P18858 NACAP6-201ENST00000509572 622 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.96□□□□□ -1.14
LIG1P18858 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.96□□□□□ -1.14
LIG1P18858 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.96□□□□□ -1.14
LIG1P18858 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.96□□□□□ -1.14
LIG1P18858 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.96□□□□□ -1.14
LIG1P18858 AL591767.3-201ENST00000554632 525 ntBASIC7.96□□□□□ -1.14
LIG1P18858 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 FAM30C-201ENST00000561158 410 ntBASIC7.96□□□□□ -1.14
LIG1P18858 ACTG1P15-201ENST00000570019 1063 ntBASIC7.96□□□□□ -1.14
LIG1P18858 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.96□□□□□ -1.14
LIG1P18858 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.96□□□□□ -1.14
LIG1P18858 MIMT1-201ENST00000597105 1050 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC124856.1-201ENST00000600819 896 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AC068802.1-201ENST00000603420 732 ntBASIC7.96□□□□□ -1.14
LIG1P18858 OR7M1P-201ENST00000608946 533 ntBASIC7.96□□□□□ -1.14
LIG1P18858 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
LIG1P18858 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC7.96□□□□□ -1.14
LIG1P18858 AC011471.4-201ENST00000638271 216 ntBASIC7.96□□□□□ -1.14
LIG1P18858 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.96□□□□□ -1.14
LIG1P18858 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 NEK2P4-201ENST00000425793 1329 ntBASIC7.96□□□□□ -1.14
LIG1P18858 AL512310.3-201ENST00000547023 1335 ntBASIC7.96□□□□□ -1.14
LIG1P18858 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.96□□□□□ -1.14
LIG1P18858 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.96□□□□□ -1.14
LIG1P18858 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
LIG1P18858 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.96□□□□□ -1.14
LIG1P18858 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LIG1P18858 AL359195.2-201ENST00000623657 4412 ntBASIC7.96□□□□□ -1.14
LIG1P18858 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
LIG1P18858 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.95□□□□□ -1.14
LIG1P18858 AC083806.2-201ENST00000617795 2685 ntBASIC7.95□□□□□ -1.14
LIG1P18858 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 SNORD116-9-201ENST00000384000 95 ntBASIC7.95□□□□□ -1.14
LIG1P18858 SNORD116-3-201ENST00000384287 95 ntBASIC7.95□□□□□ -1.14
LIG1P18858 SNORD116-7-201ENST00000384404 95 ntBASIC7.95□□□□□ -1.14
LIG1P18858 SNORD116-5-201ENST00000384462 95 ntBASIC7.95□□□□□ -1.14
LIG1P18858 MIR431-201ENST00000385266 114 ntBASIC7.95□□□□□ -1.14
LIG1P18858 OR8V1P-201ENST00000395193 873 ntBASIC7.95□□□□□ -1.14
LIG1P18858 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LIG1P18858 AC022028.1-201ENST00000412054 408 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AL158050.1-201ENST00000416077 457 ntBASIC7.95□□□□□ -1.14
LIG1P18858 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.95□□□□□ -1.14
LIG1P18858 PTP4A1P3-201ENST00000433661 420 ntBASIC7.95□□□□□ -1.14
LIG1P18858 LSM3P3-201ENST00000436601 306 ntBASIC7.95□□□□□ -1.14
LIG1P18858 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.95□□□□□ -1.14
LIG1P18858 RPL29P7-201ENST00000440227 457 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms