Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.8□□□□□ -1.32
COL11A1P12107 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.8□□□□□ -1.32
COL11A1P12107 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC6.8□□□□□ -1.32
COL11A1P12107 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 AC011742.2-201ENST00000443818 352 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.8□□□□□ -1.32
COL11A1P12107 COPS8P2-201ENST00000473228 627 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 AC074386.1-201ENST00000476560 767 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.8□□□□□ -1.32
COL11A1P12107 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.8□□□□□ -1.32
COL11A1P12107 AC083795.1-201ENST00000491760 320 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.8□□□□□ -1.32
COL11A1P12107 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
COL11A1P12107 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.8□□□□□ -1.32
COL11A1P12107 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.8□□□□□ -1.32
COL11A1P12107 AC244502.2-201ENST00000543361 851 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 MIR4776-2-201ENST00000580204 80 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 AC069234.4-201ENST00000621276 412 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 RAD17P2-201ENST00000451754 1977 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL11A1P12107 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
COL11A1P12107 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COL11A1P12107 AC092725.2-201ENST00000567658 1389 ntBASIC6.8□□□□□ -1.32
COL11A1P12107 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL11A1P12107 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 AC008957.3-201ENST00000624112 2242 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL11A1P12107 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 RNA5SP375-201ENST00000362975 119 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.79□□□□□ -1.32
COL11A1P12107 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.79□□□□□ -1.32
COL11A1P12107 AC004129.2-201ENST00000457229 287 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 OR7E157P-201ENST00000494376 911 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 AC138866.2-201ENST00000508650 584 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 OR56A7P-201ENST00000524865 941 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.79□□□□□ -1.32
COL11A1P12107 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.79□□□□□ -1.32
COL11A1P12107 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.79□□□□□ -1.32
COL11A1P12107 AL049840.6-201ENST00000604583 345 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 OFD1P17-201ENST00000437639 3018 ntBASIC6.79□□□□□ -1.32
COL11A1P12107 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.79□□□□□ -1.32
COL11A1P12107 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.79□□□□□ -1.32
COL11A1P12107 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL11A1P12107 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.79□□□□□ -1.32
COL11A1P12107 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 RNA5SP333-201ENST00000363466 118 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 RNA5SP334-201ENST00000364825 118 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 RPS4XP5-201ENST00000419038 768 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 RN7SL57P-201ENST00000493687 290 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 AC008429.4-201ENST00000521201 182 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.78□□□□□ -1.32
COL11A1P12107 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 RNU4ATAC-201ENST00000580972 127 ntBASIC6.78□□□□□ -1.32
COL11A1P12107 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.78□□□□□ -1.32
COL11A1P12107 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.78□□□□□ -1.32
COL11A1P12107 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.78□□□□□ -1.32
COL11A1P12107 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL11A1P12107 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms