Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RN7SL259P-201ENST00000478499 253 ntBASIC10.88□□□□□ -0.67
CHGAP10645 TFP1-203ENST00000490470 561 ntTSL 4 BASIC10.88□□□□□ -0.67
CHGAP10645 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC10.88□□□□□ -0.67
CHGAP10645 AC117522.1-201ENST00000509821 380 ntBASIC10.88□□□□□ -0.67
CHGAP10645 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC10.88□□□□□ -0.67
CHGAP10645 AC113191.1-201ENST00000517759 403 ntBASIC10.88□□□□□ -0.67
CHGAP10645 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC10.88□□□□□ -0.67
CHGAP10645 OR8Q1P-201ENST00000526467 655 ntBASIC10.88□□□□□ -0.67
CHGAP10645 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC10.88□□□□□ -0.67
CHGAP10645 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC10.88□□□□□ -0.67
CHGAP10645 GNG2-215ENST00000557376 573 ntTSL 4 BASIC10.88□□□□□ -0.67
CHGAP10645 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC10.88□□□□□ -0.67
CHGAP10645 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 AC068276.1-201ENST00000605793 379 ntBASIC10.88□□□□□ -0.67
CHGAP10645 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 RN7SL680P-201ENST00000620379 299 ntBASIC10.88□□□□□ -0.67
CHGAP10645 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 MFSD8-245ENST00000641743 948 ntBASIC10.88□□□□□ -0.67
CHGAP10645 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC10.88□□□□□ -0.67
CHGAP10645 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CHGAP10645 RERE-203ENST00000400907 2973 ntTSL 5 BASIC10.88□□□□□ -0.67
CHGAP10645 SAMM50P1-201ENST00000455403 1399 ntBASIC10.88□□□□□ -0.67
CHGAP10645 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC10.88□□□□□ -0.67
CHGAP10645 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC10.88□□□□□ -0.67
CHGAP10645 ENO1P4-201ENST00000416471 1785 ntBASIC10.88□□□□□ -0.67
CHGAP10645 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC10.87□□□□□ -0.67
CHGAP10645 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 RBPJP6-201ENST00000411556 1431 ntBASIC10.87□□□□□ -0.67
CHGAP10645 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 Y_RNA.70-201ENST00000362886 110 ntBASIC10.87□□□□□ -0.67
CHGAP10645 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 RPL7P30-201ENST00000420888 709 ntBASIC10.87□□□□□ -0.67
CHGAP10645 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC10.87□□□□□ -0.67
CHGAP10645 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC10.87□□□□□ -0.67
CHGAP10645 AL604028.2-201ENST00000437848 788 ntBASIC10.87□□□□□ -0.67
CHGAP10645 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC10.87□□□□□ -0.67
CHGAP10645 MTND4LP16-201ENST00000440828 295 ntBASIC10.87□□□□□ -0.67
CHGAP10645 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC10.87□□□□□ -0.67
CHGAP10645 DBIL5P2-201ENST00000443827 253 ntBASIC10.87□□□□□ -0.67
CHGAP10645 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 AL031736.1-201ENST00000449688 618 ntBASIC10.87□□□□□ -0.67
CHGAP10645 SSXP1-201ENST00000453640 473 ntBASIC10.87□□□□□ -0.67
CHGAP10645 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC10.87□□□□□ -0.67
CHGAP10645 AC007547.2-201ENST00000468802 360 ntBASIC10.87□□□□□ -0.67
CHGAP10645 RPL12P21-201ENST00000472214 518 ntBASIC10.87□□□□□ -0.67
CHGAP10645 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 OR5H5P-201ENST00000503164 928 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC091874.2-201ENST00000505889 720 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC090071.1-201ENST00000507713 644 ntBASIC10.87□□□□□ -0.67
CHGAP10645 RPL7L1P7-201ENST00000509986 724 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 DKK2-202ENST00000510463 908 ntTSL 3 BASIC10.87□□□□□ -0.67
CHGAP10645 AC008837.2-201ENST00000513076 418 ntBASIC10.87□□□□□ -0.67
CHGAP10645 SCARNA11.1-201ENST00000516918 132 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 NDUFA3P2-201ENST00000531434 232 ntBASIC10.87□□□□□ -0.67
CHGAP10645 NTS-203ENST00000551529 801 ntTSL 3 BASIC10.87□□□□□ -0.67
CHGAP10645 BMS1P15-201ENST00000554269 1141 ntBASIC10.87□□□□□ -0.67
CHGAP10645 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC10.87□□□□□ -0.67
CHGAP10645 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC10.87□□□□□ -0.67
CHGAP10645 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC10.87□□□□□ -0.67
CHGAP10645 RN7SL835P-201ENST00000579920 262 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC10.87□□□□□ -0.67
CHGAP10645 AC134669.1-201ENST00000581275 672 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 AP001542.2-201ENST00000593141 364 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 VN1R92P-201ENST00000598511 928 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AC113361.1-201ENST00000606683 543 ntBASIC10.87□□□□□ -0.67
CHGAP10645 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC10.87□□□□□ -0.67
CHGAP10645 AL159169.3-201ENST00000608871 561 ntBASIC10.87□□□□□ -0.67
CHGAP10645 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 HTR1DP1-201ENST00000616500 888 ntBASIC10.87□□□□□ -0.67
CHGAP10645 TEX41-256ENST00000626411 368 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC10.87□□□□□ -0.67
CHGAP10645 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 MTCO1P25-201ENST00000414449 1799 ntBASIC10.87□□□□□ -0.67
CHGAP10645 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CHGAP10645 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC10.87□□□□□ -0.67
CHGAP10645 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CHGAP10645 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms