Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DQA1P01909 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 RN7SKP185-201ENST00000362813 326 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 NOX1-203ENST00000372964 661 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AL391419.1-201ENST00000398901 1275 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AL445238.1-204ENST00000400311 463 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 RNA5SP231-201ENST00000410496 138 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC117434.1-201ENST00000419971 836 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 RSU1P1-201ENST00000453416 441 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 CBX1P2-201ENST00000453841 458 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 OR7E157P-201ENST00000494376 911 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 OR7E99P-201ENST00000505750 922 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC010343.2-201ENST00000510162 224 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC069240.2-201ENST00000550242 609 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AL163952.1-202ENST00000569625 600 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC027229.1-201ENST00000583887 253 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 Z93930.3-201ENST00000607919 749 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC015712.7-201ENST00000615211 635 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC007347.2-201ENST00000623044 180 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC005753.1-201ENST00000623837 618 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 AC099654.15-201ENST00000639802 509 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 OR2A3P-202ENST00000641249 1776 ntBASIC4.59□□□□□ -1.67
HLA-DQA1P01909 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DQA1P01909 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DQA1P01909 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-DQA1P01909 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC099654.3-201ENST00000447087 1546 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AL358178.1-201ENST00000407698 397 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 AL139184.1-202ENST00000422303 222 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.58□□□□□ -1.68
HLA-DQA1P01909 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-DQA1P01909 SLAMF6P1-201ENST00000451067 602 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms