Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC114982.2-201ENST00000461396 358 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.19□□□□□ -1.42
RIPK2O43353 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
RIPK2O43353 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.19□□□□□ -1.42
RIPK2O43353 AC060780.2-201ENST00000589047 198 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 AC125494.2-201ENST00000602431 657 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 MIR6731-201ENST00000614863 72 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 AL355974.3-201ENST00000617383 467 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.19□□□□□ -1.42
RIPK2O43353 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.19□□□□□ -1.42
RIPK2O43353 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 AC004014.2-201ENST00000623718 5122 ntBASIC6.19□□□□□ -1.42
RIPK2O43353 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RIPK2O43353 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.19□□□□□ -1.42
RIPK2O43353 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RIPK2O43353 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 AC232271.1-201ENST00000602455 2715 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RIPK2O43353 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RIPK2O43353 RNA5SP302-201ENST00000364896 100 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 AC026310.1-201ENST00000396004 378 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 AL353133.1-201ENST00000407695 401 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RIPK2O43353 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.18□□□□□ -1.42
RIPK2O43353 AC013268.2-201ENST00000420753 337 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.18□□□□□ -1.42
RIPK2O43353 RPS10P28-201ENST00000480396 498 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 CCDC11P1-201ENST00000503137 1162 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 BCAS2P1-201ENST00000528022 632 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 VDAC2P2-201ENST00000544463 901 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.18□□□□□ -1.42
RIPK2O43353 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.18□□□□□ -1.42
RIPK2O43353 NPM1P5-201ENST00000557228 838 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.18□□□□□ -1.42
RIPK2O43353 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.18□□□□□ -1.42
RIPK2O43353 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.18□□□□□ -1.42
RIPK2O43353 AC008555.7-201ENST00000605008 583 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 uc_338.33-201ENST00000614988 170 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 MIR6807-201ENST00000621968 92 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.18□□□□□ -1.42
RIPK2O43353 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 AC092451.3-201ENST00000625067 1343 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 AC020633.1-201ENST00000468439 2247 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RIPK2O43353 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RIPK2O43353 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.18□□□□□ -1.42
RIPK2O43353 SAMM50P1-201ENST00000455403 1399 ntBASIC6.18□□□□□ -1.42
RIPK2O43353 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.18□□□□□ -1.42
RIPK2O43353 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RIPK2O43353 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 NLRP3P1-201ENST00000622303 1785 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 AC010894.1-201ENST00000313760 361 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 RNA5SP453-201ENST00000362503 119 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 DHFRP2-201ENST00000414224 547 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.17□□□□□ -1.42
RIPK2O43353 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.17□□□□□ -1.42
RIPK2O43353 OR52U1P-201ENST00000439752 923 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RIPK2O43353 AL512593.1-201ENST00000444758 779 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.17□□□□□ -1.42
RIPK2O43353 RBMY2EP-202ENST00000456360 940 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.17□□□□□ -1.42
RIPK2O43353 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.17□□□□□ -1.42
RIPK2O43353 RPL12P31-201ENST00000478433 450 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 PPP1R11P1-201ENST00000486095 376 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 AC111000.5-201ENST00000506559 1178 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 AC093664.1-201ENST00000511779 289 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 Y_RNA.710-201ENST00000516975 110 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 RN7SKP5-201ENST00000517045 272 ntBASIC6.17□□□□□ -1.42
RIPK2O43353 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms