Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXN3O00409 TXNP2-201ENST00000443918 295 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 WDR82P2-201ENST00000444540 928 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 RPS7P11-201ENST00000484240 586 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 AC008628.1-201ENST00000508663 265 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 AC112206.4-201ENST00000515142 405 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.82□□□□□ -1.32
FOXN3O00409 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXN3O00409 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXN3O00409 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.82□□□□□ -1.32
FOXN3O00409 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 AL589743.6-201ENST00000611025 117 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 MIR6503-201ENST00000622884 86 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 AC006453.5-201ENST00000636451 619 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 AC010168.2-201ENST00000562691 5428 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 DDX6P1-205ENST00000441966 1436 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXN3O00409 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
FOXN3O00409 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.82□□□□□ -1.32
FOXN3O00409 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
FOXN3O00409 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.82□□□□□ -1.32
FOXN3O00409 WBP11P1-201ENST00000562560 1931 ntBASIC6.82□□□□□ -1.32
FOXN3O00409 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.82□□□□□ -1.32
FOXN3O00409 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXN3O00409 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.81□□□□□ -1.32
FOXN3O00409 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
FOXN3O00409 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
FOXN3O00409 RNU4-39P-201ENST00000362455 127 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 TMA16P2-201ENST00000413187 601 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXN3O00409 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 GTF2IP14-201ENST00000441415 586 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 PPIAP32-201ENST00000449940 472 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AL034369.1-201ENST00000453808 477 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 PCNAP1-201ENST00000505363 709 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
FOXN3O00409 RNU2-45P-201ENST00000516068 187 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXN3O00409 OR4R2P-201ENST00000530815 597 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXN3O00409 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.81□□□□□ -1.32
FOXN3O00409 AC009120.3-201ENST00000563335 499 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 CCDC58P1-201ENST00000578567 430 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 MIR4732-201ENST00000581873 76 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 AC005332.4-201ENST00000592752 579 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 RPL12P48-201ENST00000605620 304 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AL390877.1-201ENST00000605704 214 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 AC125238.2-201ENST00000430003 1440 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXN3O00409 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.81□□□□□ -1.32
FOXN3O00409 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
FOXN3O00409 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
FOXN3O00409 AL033543.1-201ENST00000623440 13454 ntBASIC6.81□□□□□ -1.32
FOXN3O00409 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.8□□□□□ -1.32
FOXN3O00409 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
FOXN3O00409 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.8□□□□□ -1.32
FOXN3O00409 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
FOXN3O00409 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.8□□□□□ -1.32
FOXN3O00409 AC116036.1-201ENST00000412199 367 ntBASIC6.8□□□□□ -1.32
FOXN3O00409 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.8□□□□□ -1.32
FOXN3O00409 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.8□□□□□ -1.32
FOXN3O00409 AC002127.1-201ENST00000421305 225 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms