Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SLC28A1O00337 AC063952.1-203ENST00000634410 658 ntBASIC5.93□□□□□ -1.46
SLC28A1O00337 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SLC28A1O00337 AC090220.1-201ENST00000593078 1699 ntBASIC5.93□□□□□ -1.46
SLC28A1O00337 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SLC28A1O00337 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SLC28A1O00337 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.93□□□□□ -1.46
SLC28A1O00337 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.93□□□□□ -1.46
SLC28A1O00337 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SLC28A1O00337 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.93□□□□□ -1.46
SLC28A1O00337 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC022164.1-201ENST00000568767 2673 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SLC28A1O00337 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC217777.1-201ENST00000570034 1471 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC003045.1-201ENST00000398779 713 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 OR6C71P-201ENST00000432580 913 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 WDR82P2-201ENST00000444540 928 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC063955.1-201ENST00000462872 685 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 RN7SL502P-201ENST00000481857 290 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 Y_RNA.710-201ENST00000516975 110 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC28A1O00337 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AC025283.1-201ENST00000572039 734 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 AC115989.2-201ENST00000578640 563 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 OOSP1P2-201ENST00000579644 351 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 MIR4420-201ENST00000583944 77 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AP001267.4-201ENST00000602598 545 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 AL591167.1-201ENST00000607321 456 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 AC068726.1-201ENST00000610993 341 ntBASIC5.92□□□□□ -1.46
SLC28A1O00337 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC28A1O00337 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC28A1O00337 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC28A1O00337 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC28A1O00337 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC28A1O00337 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC28A1O00337 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC28A1O00337 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AP002512.4-202ENST00000641599 4530 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AL137141.1-201ENST00000624622 4836 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC28A1O00337 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
SLC28A1O00337 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
SLC28A1O00337 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC28A1O00337 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
SLC28A1O00337 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 NFYAP1-201ENST00000431953 972 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AL162739.1-201ENST00000450606 307 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 RN7SL39P-201ENST00000462264 297 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 RPL5P16-201ENST00000471467 790 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AC124945.1-201ENST00000485133 188 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 RPL23AP40-201ENST00000487630 390 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC015524.1-201ENST00000491585 472 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC093325.1-201ENST00000508378 326 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC139713.1-202ENST00000512366 460 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC28A1O00337 AL049779.3-201ENST00000557141 606 ntBASIC5.91□□□□□ -1.46
SLC28A1O00337 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms