Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC016734.1-201ENST00000436998 654 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 TUBB4BP2-201ENST00000454125 798 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 DAP3-209ENST00000465375 729 ntTSL 2 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 E2F6P4-201ENST00000468625 514 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 UCK2-205ENST00000469256 753 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL7AP23-201ENST00000482625 776 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 RN7SL306P-201ENST00000492941 296 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 OR7E157P-201ENST00000494376 911 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 OR7E99P-201ENST00000505750 922 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC107918.3-201ENST00000533272 382 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL049779.3-201ENST00000557141 606 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC091078.2-201ENST00000557145 559 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 SOD1P2-201ENST00000563903 451 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC091304.4-201ENST00000565703 620 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL645949.1-202ENST00000600073 242 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL606537.1-201ENST00000607258 2011 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 IGKV2OR2-10-201ENST00000613976 311 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC00901.1-201ENST00000617252 152 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 REV3L-214ENST00000619481 969 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AP000590.1-201ENST00000624943 464 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 MIR3120-201ENST00000636555 81 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 OR7E161P-202ENST00000641994 1033 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF710-AS1-202ENST00000620791 2133 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 SAGE3P-201ENST00000619800 1635 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 UBBP2-201ENST00000376781 231 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC005005.1-201ENST00000397595 682 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC113608.1-201ENST00000398740 305 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 RPS24P12-201ENST00000402084 394 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 SOD1P1-201ENST00000407803 440 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 MRPS21P5-201ENST00000417885 231 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC231533.2-201ENST00000419045 978 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 GTF2IP2-201ENST00000424290 697 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 OR5P4P-201ENST00000424698 917 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AC108479.1-201ENST00000431142 427 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 EIF5AP4-201ENST00000441206 465 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 SNRPBP1-201ENST00000443634 282 ntBASIC3.22□□□□□ -1.89
CHKB-CPT1BH3BT56 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms