Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC020978.9-201ENST00000624380 1141 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AL138960.2-201ENST00000625145 535 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 THAP12P8-201ENST00000447914 2115 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AC018717.1-201ENST00000457712 1505 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 AL731532.1-201ENST00000623972 4236 ntBASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.29□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC007159.1-201ENST00000566529 4706 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 GNG5P2-201ENST00000372054 207 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AL731534.1-201ENST00000434711 269 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 SOCS5P1-201ENST00000440415 949 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AL034369.1-201ENST00000453808 477 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 RN7SL39P-201ENST00000462264 297 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AP003385.3-201ENST00000472498 287 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 Y_RNA.710-201ENST00000516975 110 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC135983.3-201ENST00000528049 1226 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC025423.2-201ENST00000537570 439 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TCRBV7S3A2A0A539 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
TCRBV7S3A2A0A539 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 RNA5SP346-201ENST00000363541 121 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 RNA5SP77-201ENST00000365394 120 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AL607077.1-201ENST00000401718 499 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 OSTCP4-201ENST00000424397 449 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 MTCO1P57-201ENST00000432182 261 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 PPIAP10-201ENST00000438675 458 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 EMC3-AS1-205ENST00000438698 534 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 NPM1P23-201ENST00000440193 849 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 MTCO3P43-201ENST00000440974 771 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 OR2L9P-201ENST00000444456 913 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC022730.1-201ENST00000473114 568 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 DEFB109A-201ENST00000482450 265 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 CYP4F27P-201ENST00000514557 494 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC021146.10-201ENST00000515628 706 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 MTND1P36-201ENST00000522384 936 ntBASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.27□□□□□ -1.41
TCRBV7S3A2A0A539 AC037479.1-201ENST00000558361 625 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms