Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL033519.1-201ENST00000407266 307 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 BX119904.3-201ENST00000428194 957 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC073410.1-201ENST00000435125 589 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL512593.1-201ENST00000444758 779 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RPL23AP60-201ENST00000450011 454 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RNU6-551P-201ENST00000516661 103 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC026898.1-201ENST00000586404 571 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AL512430.4-201ENST00000603085 613 ntBASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRBV4-1A0A0J9YWV2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV4-1A0A0J9YWV2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV4-1A0A0J9YWV2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
TRBV4-1A0A0J9YWV2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV4-1A0A0J9YWV2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC024651.2-201ENST00000562480 2098 ntBASIC5.59□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC093297.3-201ENST00000607056 2517 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC011416.1-201ENST00000514947 1732 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AL157702.1-201ENST00000398764 426 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 UBTFL2-201ENST00000411859 1191 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 OR52N3P-201ENST00000413417 934 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC092646.1-201ENST00000427142 901 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 KATNBL1P2-201ENST00000433311 835 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 EIF3LP2-201ENST00000457262 807 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 TREML3P-201ENST00000457327 501 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC090058.1-201ENST00000498788 435 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AP001960.1-201ENST00000506494 658 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC093816.1-201ENST00000515076 913 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC005224.3-201ENST00000584683 2140 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AP001357.1-201ENST00000586304 1053 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC020658.4-201ENST00000613987 684 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC027506.1-201ENST00000621395 198 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 AC243960.7-201ENST00000623532 707 ntBASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRBV4-1A0A0J9YWV2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRBV4-1A0A0J9YWV2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms