Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 NCOA4P3-201ENST00000513203 1877 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC115283.1-201ENST00000427353 400 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC003989.1-201ENST00000434569 565 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 SNORD116-30-201ENST00000516468 85 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC005632.2-201ENST00000564271 828 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 OR1E3-201ENST00000575608 948 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AP000919.1-201ENST00000582850 985 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL078623.1-201ENST00000602702 907 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 BUB1P1-201ENST00000603541 607 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC009948.4-201ENST00000604692 675 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC016597.2-201ENST00000613256 341 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL512506.1-201ENST00000613918 449 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 WBP1LP8-201ENST00000617401 327 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC009269.6-201ENST00000621778 588 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC090772.4-201ENST00000623599 362 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL596275.2-208ENST00000641192 594 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL359976.1-201ENST00000418655 3528 ntBASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
CTDP1Q9Y5B0 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 MTND4P21-201ENST00000453886 1357 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 MTATP6P31-201ENST00000406985 692 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 EMC3-AS1-205ENST00000438698 534 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC002486.2-201ENST00000447806 590 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 MTND2P25-201ENST00000449028 610 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC015908.1-201ENST00000478739 476 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC022415.1-202ENST00000486612 523 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC108729.1-201ENST00000487812 947 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC006512.2-201ENST00000543250 486 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC090888.3-201ENST00000558917 509 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 NDUFA5P11-201ENST00000567995 343 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC134669.1-201ENST00000581275 672 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC025171.4-201ENST00000607250 1047 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 MIR6861-201ENST00000618657 64 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AC140479.2-201ENST00000421567 3130 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms