Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 MIR191-201ENST00000384873 92 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AL096800.1-201ENST00000405326 893 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AL354766.1-201ENST00000423396 542 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AC007383.1-201ENST00000445875 636 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 VPS25P1-201ENST00000455691 508 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL39P-201ENST00000462264 297 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL326P-201ENST00000477493 296 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 MIR7159-201ENST00000620587 66 ntBASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TRAPPC4Q9Y296 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC123769.1-201ENST00000530992 3192 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 RN7SKP186-201ENST00000365371 303 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 U3.23-201ENST00000391132 200 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 PSMA6P1-201ENST00000400275 741 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 RN7SKP146-201ENST00000410242 334 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 DHFRP2-201ENST00000414224 547 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 RPL6P21-201ENST00000418672 846 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC015977.1-201ENST00000418887 292 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC016027.5-201ENST00000427227 210 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC090602.1-201ENST00000469695 252 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL369P-201ENST00000477138 299 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 GM2AP2-201ENST00000491764 562 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 MT1CP-201ENST00000567054 174 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL475P-201ENST00000583379 298 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 NDUFB9P1-201ENST00000604683 510 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AC015819.1-201ENST00000613588 663 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 USP9YP3-201ENST00000434481 1766 ntBASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRAPPC4Q9Y296 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 PPBPP2-201ENST00000513150 1362 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC024651.2-201ENST00000562480 2098 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms