Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 STAG3L4-201ENST00000352103 530 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 NACA3P-201ENST00000359690 648 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 RNU6-413P-201ENST00000384115 107 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 SNORA70.8-201ENST00000384231 136 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 MT-TH-201ENST00000387441 69 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 U3.28-201ENST00000391249 210 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 SNORA26.8-201ENST00000391306 124 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC083855.1-201ENST00000440041 258 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC244505.3-201ENST00000454598 187 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 RPL7L1P3-201ENST00000455249 689 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC008496.1-201ENST00000509131 295 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AP000873.5-201ENST00000533906 236 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC011611.5-201ENST00000552477 578 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 OR11H3P-201ENST00000554547 982 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AL049830.4-201ENST00000555149 351 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC016629.2-201ENST00000597341 199 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC021749.1-201ENST00000604322 607 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AP002345.2-201ENST00000609961 904 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AL157359.3-201ENST00000623771 217 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 AC008626.2-201ENST00000624425 248 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 OR1S1-201ENST00000624470 978 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 MAPK10-347ENST00000641762 2856 ntBASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
ZC3H4Q9UPT8 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC217777.1-201ENST00000570034 1471 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC131649.2-201ENST00000624925 4439 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC010894.1-201ENST00000313760 361 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 SNORD35A-201ENST00000363389 86 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 RNA5SP435-201ENST00000364044 108 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ERHP2-201ENST00000402323 299 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ZNF863P-201ENST00000426746 417 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 YWHAZP7-201ENST00000436906 631 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC098614.3-201ENST00000438957 440 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 RPL21P33-201ENST00000444831 484 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 SEPT14P24-201ENST00000447236 180 ntBASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.93□□□□□ -0.98
ZC3H4Q9UPT8 CCNJP2-201ENST00000457810 1163 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms