Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RPSAP60-201ENST00000415403 880 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 ZNF885P-201ENST00000420174 1098 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 MTCO1P53-201ENST00000441633 699 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AL358794.1-201ENST00000445689 381 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC009244.1-201ENST00000450566 258 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC022336.1-201ENST00000475510 337 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 EIF1P7-201ENST00000487533 337 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 HMGB1P38-201ENST00000490557 577 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AP000563.1-201ENST00000490865 758 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 NOP56P3-201ENST00000549457 385 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 MTND3P13-201ENST00000574391 343 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC113368.1-201ENST00000603736 382 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC012557.2-201ENST00000605919 418 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AL513218.1-201ENST00000606527 391 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 MRPL57P3-201ENST00000619218 176 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC011330.2-201ENST00000621680 635 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC083865.1-201ENST00000636634 831 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC006927.2-201ENST00000639256 389 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AL591848.4-201ENST00000567832 3472 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 AC110597.1-201ENST00000562669 3176 ntBASIC7.08□□□□□ -1.28
PPARGC1AQ9UBK2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 NEK2P2-201ENST00000438441 1338 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AL596244.1-201ENST00000567068 3779 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 OR10AB1P-202ENST00000641219 1686 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC004014.2-201ENST00000623718 5122 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RNU6-1331P-201ENST00000363658 106 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC017078.1-201ENST00000416146 368 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC009303.1-201ENST00000426307 352 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC245517.2-201ENST00000442890 346 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RPL23AP23-201ENST00000452590 471 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 MEF2AP1-201ENST00000454867 863 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RN7SL390P-201ENST00000470634 284 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC020779.1-201ENST00000478757 796 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AL079303.1-201ENST00000486611 463 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 CASP1P2-201ENST00000526830 1258 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC125611.1-201ENST00000549563 229 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 PPIAP6-201ENST00000557078 499 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC023825.1-201ENST00000566704 1030 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AP000919.1-202ENST00000581139 1264 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC079880.2-201ENST00000603790 1213 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 RNU4-5P-201ENST00000607255 135 ntBASIC7.07□□□□□ -1.28
PPARGC1AQ9UBK2 AC092954.1-201ENST00000609121 445 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms