Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AL157831.2-201ENST00000564681 3095 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 RNA5SP333-201ENST00000363466 118 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 RNA5SP334-201ENST00000364825 118 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AL353662.1-201ENST00000439099 327 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 RPL12P11-201ENST00000439970 501 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC016908.1-201ENST00000442571 1219 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC023194.2-201ENST00000465398 406 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 RPA2P3-201ENST00000533268 770 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC018558.5-201ENST00000565840 952 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC027229.1-201ENST00000583887 253 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC068768.2-201ENST00000602352 343 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AL513218.1-201ENST00000606527 391 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC108865.2-201ENST00000606881 432 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AL365181.4-201ENST00000609800 547 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC024884.1-201ENST00000620583 399 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AL162377.2-201ENST00000624532 337 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 BIN2P1-201ENST00000504996 1530 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 AC022905.1-201ENST00000503430 3048 ntBASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLCF1Q9UBD9 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ZNF402P-201ENST00000404435 3100 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC062029.1-202ENST00000606164 3651 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC110373.1-201ENST00000505994 3505 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ZNF969P-201ENST00000510345 2341 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 OFD1P17-201ENST00000437639 3018 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC011416.1-201ENST00000514947 1732 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 SNORA43.1-201ENST00000364863 140 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 RNA5SP156-201ENST00000410250 110 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 VN1R3-201ENST00000418822 919 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 TRGV5P-201ENST00000419915 354 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 GAPDHP23-201ENST00000444823 993 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC094085.1-201ENST00000468914 584 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 FTH1P8-201ENST00000498161 514 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AP004607.6-201ENST00000525033 1202 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AC021269.1-201ENST00000526860 705 ntBASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCF1Q9UBD9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms