Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC087516.1-201ENST00000561236 2428 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 RNA5SP375-201ENST00000362975 119 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC245096.1-201ENST00000413104 546 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 CUBNP2-201ENST00000443534 1139 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 NPM1P9-201ENST00000453156 844 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 TREML3P-201ENST00000457327 501 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 RPL23AP40-201ENST00000487630 390 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 RNA5SP75-201ENST00000516841 111 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 DPPA3P2-202ENST00000557188 1219 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AP001357.1-201ENST00000586304 1053 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AL078624.2-201ENST00000605063 554 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC068726.1-201ENST00000610993 341 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 AC000095.2-202ENST00000637415 154 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VAPAQ9P0L0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.75□□□□□ -1.49
VAPAQ9P0L0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 RN7SKP186-201ENST00000365371 303 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 VIM2P-201ENST00000402383 1294 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 RN7SKP166-201ENST00000410812 305 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 ELOBP4-201ENST00000423418 296 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC013403.1-201ENST00000436954 263 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 OR2L9P-201ENST00000444456 913 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 OSTCP1-201ENST00000455507 450 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC093719.1-201ENST00000480427 441 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 CCDC11P1-201ENST00000503137 1162 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 ST13P12-201ENST00000508958 1094 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC068408.1-201ENST00000577406 1144 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC099777.1-201ENST00000603779 1070 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC009237.12-201ENST00000604755 742 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC068213.1-201ENST00000625124 226 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC138907.8-201ENST00000623981 2256 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC010401.2-201ENST00000575137 4934 ntBASIC5.74□□□□□ -1.49
VAPAQ9P0L0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.74□□□□□ -1.49
VAPAQ9P0L0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms