Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 RPL31P11-202ENST00000454082 372 ntBASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AL049779.3-201ENST00000557141 606 ntBASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AC027796.1-201ENST00000575593 512 ntBASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 SAGE3P-201ENST00000619800 1635 ntBASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AL359955.1-201ENST00000455242 3275 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC010894.1-201ENST00000313760 361 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 MIR133A2-201ENST00000347538 102 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 RNA5SP453-201ENST00000362503 119 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 RNA5SP308-201ENST00000362532 115 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 U3.52-201ENST00000384034 216 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC006509.1-201ENST00000420788 634 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AL731534.1-201ENST00000434711 269 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 PPIAP32-201ENST00000449940 472 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AL034369.1-201ENST00000453808 477 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 VPS25P1-201ENST00000455691 508 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 RN7SL790P-201ENST00000474043 298 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 RN7SL502P-201ENST00000481857 290 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 ST13P12-201ENST00000508958 1094 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC083837.1-201ENST00000565297 2994 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC092718.4-201ENST00000566639 716 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC245052.7-201ENST00000601161 359 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 U91328.4-201ENST00000608919 517 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AL008723.3-201ENST00000608926 449 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 MIR6774-201ENST00000614651 70 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC018628.1-201ENST00000624147 3819 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 AC092451.3-201ENST00000625067 1343 ntBASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.73□□□□□ -1.49
CCNB1IP1Q9NPC3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AL137141.1-201ENST00000624622 4836 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AL442128.2-201ENST00000620246 1824 ntBASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCNB1IP1Q9NPC3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms