Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC022507.1-201ENST00000548349 1505 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 AC112243.1-201ENST00000623949 3851 ntBASIC7.16□□□□□ -1.26
SSU72Q9NP77 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SSU72Q9NP77 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SSU72Q9NP77 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 OR4G1P-202ENST00000641173 1788 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC016251.2-201ENST00000623393 3089 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC007406.5-201ENST00000570140 3170 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 RNU5E-4P-201ENST00000364931 120 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 Y_RNA.516-201ENST00000384541 124 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 Y_RNA.517-201ENST00000384551 106 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 XKRYP4-201ENST00000414395 483 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 BTF3P8-201ENST00000414577 526 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 RPL7AP72-201ENST00000417266 768 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL049610.1-201ENST00000423374 372 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 RANP5-201ENST00000427731 655 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL451074.4-201ENST00000447545 470 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 XKRYP5-201ENST00000449659 483 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 CYCSP42-201ENST00000450823 238 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 NMNAT1P3-201ENST00000457517 888 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 ALG13-214ENST00000482742 620 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC068724.1-201ENST00000487100 792 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 LINC00888-204ENST00000487386 421 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 HPRT1P2-201ENST00000505250 544 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC011611.6-201ENST00000547483 255 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 OR11H3P-201ENST00000554547 982 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL512347.1-201ENST00000566420 503 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 RN7SL835P-201ENST00000579920 262 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL049840.6-201ENST00000604583 345 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC111186.1-201ENST00000604684 130 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AP004372.1-201ENST00000604842 844 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL683813.2-201ENST00000605245 502 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC131009.3-201ENST00000621809 287 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AF246928.1-201ENST00000623768 87 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 AC241377.2-202ENST00000636462 997 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 AL596275.2-207ENST00000641188 675 ntBASIC7.15□□□□□ -1.26
SSU72Q9NP77 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SSU72Q9NP77 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.15□□□□□ -1.26
SSU72Q9NP77 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 AL158152.1-201ENST00000602652 1435 ntBASIC7.15□□□□□ -1.27
SSU72Q9NP77 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.15□□□□□ -1.27
SSU72Q9NP77 AC006042.3-201ENST00000454684 1469 ntBASIC7.15□□□□□ -1.27
SSU72Q9NP77 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SSU72Q9NP77 AL157713.1-201ENST00000379752 1531 ntBASIC7.15□□□□□ -1.27
SSU72Q9NP77 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms