Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNA5SP140-201ENST00000364524 92 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RN7SKP191-201ENST00000364713 306 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RN7SKP281-201ENST00000410472 352 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RN7SKP38-201ENST00000410782 309 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 MTND1P10-201ENST00000426108 832 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 MED28P4-201ENST00000433137 572 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 GAPDHP75-201ENST00000433910 943 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AL592114.2-201ENST00000440142 532 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 SNRPFP2-201ENST00000440710 251 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RPL7L1P3-201ENST00000455249 689 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RPS3AP49-201ENST00000472161 790 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AGGF1P3-201ENST00000493675 1213 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC117500.1-201ENST00000497352 755 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AL121839.1-201ENST00000556233 1185 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC090651.1-201ENST00000567865 634 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RN7SL689P-201ENST00000577215 297 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AL137000.1-201ENST00000610528 1244 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RAB28P4-201ENST00000622233 665 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RBPJP6-201ENST00000411556 1431 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 Z95114.1-201ENST00000624264 14574 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AP001541.1-201ENST00000623322 1904 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 SNORD35A-201ENST00000363389 86 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 MIR433-201ENST00000384837 93 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 RNU11-6P-201ENST00000391127 133 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC245036.1-201ENST00000391727 309 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 NPM1P37-201ENST00000403105 874 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 RCC2P2-201ENST00000422174 918 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL392003.1-201ENST00000434394 243 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL390879.1-201ENST00000439143 386 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL161722.1-201ENST00000446972 1032 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL929410.2-201ENST00000451170 189 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 OR9A1P-202ENST00000484361 945 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC105391.1-201ENST00000503155 1045 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 RN7SKP196-201ENST00000516267 345 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 RPS4XP21-201ENST00000603814 750 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL049829.3-202ENST00000604278 711 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS33AQ96AX1 MIR6085-201ENST00000618314 110 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AL391597.1-201ENST00000618707 694 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC103564.3-201ENST00000621194 220 ntBASIC6.04□□□□□ -1.44
VPS33AQ96AX1 AC005514.1-201ENST00000623521 208 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms