Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 AC102941.1-201ENST00000567616 1537 ntBASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 LCOR-201ENST00000286067 4542 ntBASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 AL359694.2-201ENST00000567753 1615 ntBASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM48Q8IWZ4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AL121949.2-201ENST00000403446 1548 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 RAD1P1-201ENST00000231383 813 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC017079.1-201ENST00000333650 415 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 Y_RNA.169-201ENST00000363745 96 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 RN7SKP189-201ENST00000365042 330 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 RNU6-796P-201ENST00000391086 107 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 LDHAP5-201ENST00000394996 622 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 RPLP1P10-201ENST00000413972 339 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AL606490.7-201ENST00000433136 191 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC245047.1-201ENST00000433276 873 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 PSMD8P1-201ENST00000436275 769 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 LSM3P3-201ENST00000436601 306 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AL845321.1-201ENST00000444603 348 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 RBMY2HP-201ENST00000457961 720 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC022336.1-201ENST00000475510 337 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 PPP1R2P6-201ENST00000478565 588 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AK4P6-201ENST00000505168 528 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 MRPS5P3-201ENST00000515577 166 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 OR7E128P-201ENST00000532736 1024 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC068790.2-201ENST00000602601 557 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 U91328.4-201ENST00000608919 517 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC026585.1-201ENST00000619582 524 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 MIR3974-201ENST00000637126 96 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC183089.2-201ENST00000637931 916 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AP002800.1-201ENST00000624982 2225 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 AC004023.1-201ENST00000561473 1744 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 DLEU2L-201ENST00000371086 3555 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 ATP5BP1-201ENST00000411980 1574 ntBASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM48Q8IWZ4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
TRIM48Q8IWZ4 NEK2P2-201ENST00000438441 1338 ntBASIC6.77□□□□□ -1.32
TRIM48Q8IWZ4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
TRIM48Q8IWZ4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms