Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC232271.1-201ENST00000602455 2715 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL591135.1-201ENST00000401578 5914 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 RNU6-152P-201ENST00000384037 107 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL358178.1-201ENST00000407698 397 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 UBE2V1P15-201ENST00000407776 448 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 HMGA1P8-201ENST00000414130 321 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 MTND4LP21-201ENST00000415303 295 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL357078.2-201ENST00000416486 427 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL691517.1-201ENST00000440833 1235 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 MORF4L1P4-201ENST00000450245 976 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 RPL19P11-201ENST00000495944 589 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 RN7SL689P-201ENST00000577215 297 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC245052.7-201ENST00000601161 359 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL031429.2-201ENST00000602605 649 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL008723.3-201ENST00000608926 449 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AL512506.1-201ENST00000613918 449 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC103564.3-201ENST00000621194 220 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC027559.1-201ENST00000636288 271 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.72□□□□□ -1.49
SHFQ7M4L6 SMG1P5-202ENST00000529428 4219 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 SMG1P2-201ENST00000566127 4221 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC126474.2-201ENST00000623268 1750 ntBASIC5.72□□□□□ -1.49
SHFQ7M4L6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHFQ7M4L6 AC022164.1-201ENST00000568767 2673 ntBASIC5.71□□□□□ -1.49
SHFQ7M4L6 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHFQ7M4L6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.71□□□□□ -1.49
SHFQ7M4L6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHFQ7M4L6 HSPD1P1-201ENST00000503199 1726 ntBASIC5.71□□□□□ -1.49
SHFQ7M4L6 AL513548.1-201ENST00000562904 1724 ntBASIC5.71□□□□□ -1.49
SHFQ7M4L6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SHFQ7M4L6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL359955.1-201ENST00000455242 3275 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL080312.1-201ENST00000256654 824 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 RNU6-618P-201ENST00000363518 112 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC074375.1-201ENST00000372993 192 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 RANP6-201ENST00000413691 644 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 RPL12P43-201ENST00000420608 499 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC007562.1-201ENST00000421819 517 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms